Nocardioides jishulii: FCL41_10125
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Entry
FCL41_10125 CDS
T06163
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
noi
Nocardioides jishulii
Brite
KEGG Orthology (KO) [BR:
noi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noi03021
]
FCL41_10125
Transcription machinery [BR:
noi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FCL41_10125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_3
HTH_31
MarR_2
HTH_37
HTH_Crp_2
DUF7343
MarR
DUF134
Motif
Other DBs
NCBI-ProteinID:
QCX27840
LinkDB
All DBs
Position
complement(2149316..2150161)
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AA seq
281 aa
AA seq
DB search
MEQDQERARPSAGPEGPAIVPAPREPAHESMPREARMSLVAELFARSRTAQGEEREAFLR
EIVLLNQCVAESIAMRYVGRGIAPDDLRQVACEALVKAVHRFDPTRDRDLLSYAVPTIRG
EIRRHFRDHGWSVRPPRRIQEVQAQVTRATDELAKKHGRDPEVAEVLDEVGISRHEYDQA
VQAYGSFRAASLDQPRGADGSAAWSELMADDPRTEEVEARLTLAPVVRQLPARDRRILYL
RFYEDMTQSEIGQELGVTQTQVSRLLTGIYDKVRAEVGDIA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggatcaagaacgcgcccgtccttccgccggacctgagggtccggccatcgtt
cccgcccccagggagcctgcccacgagtcgatgccgcgcgaggcccgcatgtcactggtg
gcagagctcttcgcccgcagccgaacggcgcagggcgaggagcgtgaggcgttcctcagg
gagatcgtcctgctcaaccagtgcgtcgccgagtcgatcgcgatgcgctacgtcggacgt
ggcatcgcgcccgacgacctgcgccaggtcgcgtgcgaggccctggtcaaggcggtgcac
cggttcgaccccacgcgcgaccgcgacctgctgagctatgcggtgcccacgatccggggt
gagatcaggcgacacttccgcgaccacggctggtcggtccgaccgccacggcgcatccag
gaggtccaggcccaggtcacccgggccaccgacgagctcgccaagaagcacggtcgtgac
ccggaggtcgcggaggtgctcgacgaggtgggcatcagccgccacgagtacgaccaggcc
gtgcaggcctacggctccttccgggcggcgtccctggaccagccgcgaggtgccgacggc
agtgccgcctggtcagagctgatggccgacgatccgcggaccgaggaggtcgaggcccgc
ttgacgttggctcccgtcgtccgtcagctgccagcccgtgaccgtcgcatcctctacctg
cgtttctacgaggacatgacgcagtcagagatcggccaggagctgggggtcacccagacg
caggtgtcccgcctcctgaccgggatctacgacaaggtgagggccgaggtcggcgacatc
gcctga
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