Nocardioides jishulii: FCL41_10205
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Entry
FCL41_10205 CDS
T06163
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
noi
Nocardioides jishulii
Brite
KEGG Orthology (KO) [BR:
noi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noi03032
]
FCL41_10205
03400 DNA repair and recombination proteins [BR:
noi03400
]
FCL41_10205
Enzymes [BR:
noi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FCL41_10205
DNA replication proteins [BR:
noi03032
]
Prokaryotic type
DNA Topoisomerases
FCL41_10205
DNA repair and recombination proteins [BR:
noi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FCL41_10205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QCX27855
LinkDB
All DBs
Position
complement(2164079..2165080)
Genome browser
AA seq
333 aa
AA seq
DB search
MRLRHVSRESPGWTRRRAGKGFALLDQDGRPLPEEERQRVRDLAIPPAWTDVWICPDPRG
HLQAVGTDDAGRLQYLYHPAWREKKDAEKFERCQELGAALGRARGRVARDLALSGMPADR
ACAVAFRLLDLGCFRVGNDVYADTYGSFGLTTLERSHVRQKRGVLHFDFIGKSGVEHHVE
LADADLVAALGTMRRRRDEGLCLLVSRAGPTWAPLTSEVVNDYIRRTTGVDATAKDFRTW
HATVIAAAVLGDEGPATTKKERSAALTRTWEEASSLLGNTPTQARTSYVDPRVVDAYDEG
RTVKRAVARAQLEGQERSRRLELAVLRLLDGEE
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgaggcacgtctcgcgggagagccccgggtggacccgacgtcgggccggcaag
ggcttcgccctgctggaccaggacggccgtccgctgccggaggaggagcgtcagcgtgtc
cgtgacctggcgatcccgccggcgtggaccgacgtgtggatctgccccgacccccgcggc
cacctccaggccgtcggcaccgacgacgccggacgcctccagtacctctaccacccggcc
tggcgggagaagaaggacgcagagaagttcgagcgctgccaggagctgggcgctgccctg
ggccgtgcgcgcggacgggtcgcccgtgacctggcgctctccggcatgccggccgaccgg
gcctgcgccgtcgccttccgcctcctggacctcggctgcttccgggtcggcaacgacgtc
tacgccgacacgtacggcagcttcgggctcaccacgctcgagcgcagccacgtcaggcag
aagcggggcgtgctgcacttcgacttcatcggcaagtccggcgtggagcaccacgtcgag
ctcgcggacgctgacctggtcgcggcgctcggcacgatgcggcgacggcgcgacgaaggg
ctctgcctcctcgtctcccgtgcagggccgacgtgggcaccgctcacctccgaggtcgtc
aacgactacatccgccgcaccacgggcgtcgacgccacggccaaggacttcaggacgtgg
cacgcgaccgtcatcgccgccgccgtcctgggggacgaggggcctgcgacgaccaagaag
gagcggagcgcggccctgacccgcacgtgggaggaggcctcgagcctcctgggcaacacg
cccacccaggcgcggacctcctacgtcgacccgcgcgtggtcgacgcctacgacgaggga
cgcaccgtgaagcgcgccgtggccagggcgcagctggagggccaggagcgctcccgacgc
ctcgagctggccgtgctgcggctgctcgacggcgaggagtga
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