Nocardioides jishulii: FCL41_13330
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Entry
FCL41_13330 CDS
T06163
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
noi
Nocardioides jishulii
Pathway
noi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
noi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FCL41_13330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noi03021
]
FCL41_13330
03400 DNA repair and recombination proteins [BR:
noi03400
]
FCL41_13330
Enzymes [BR:
noi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FCL41_13330
Transcription machinery [BR:
noi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FCL41_13330
DNA repair and recombination proteins [BR:
noi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FCL41_13330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF4843
Motif
Other DBs
NCBI-ProteinID:
QCX28395
LinkDB
All DBs
Position
complement(2819468..2820484)
Genome browser
AA seq
338 aa
AA seq
DB search
MLIAQRPTLSEETVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGASVTSIKIDSVL
HEFSTVEGVTEDVTEIILNLKGLVVSSEHDEPVTMYLRKSGAGDVTAADITPPAGVEVHN
PDLKIATLSDSGKLEMELVVERGRGYVSAVQNKGGDNEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVIDVETKPSIRPRDAIASAGKTLVELFGLARELNVEAEGIDIGPSPVD
EQLAADLALPVEDLQLTVRSYNCLKREGIHTVGELIGRSEQDLLDIRNFGAKSIDEVKAK
LVEMGLSLKDSAPGFDPHAALAAYSDDDDASYVEDEQY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgcttatcgctcagcgcccgaccctgtcggaagagaccgttgacgagttccgctcccgg
ttcgtgatcgagcccctggagcctggcttcggttacacgctcggcaactcgctgcgtcgt
accctgctctcctccatcccgggagcctcggtcaccagcatcaagatcgacagcgttctc
cacgagttctccaccgtcgagggcgtcaccgaggacgtcaccgagatcatcctcaacctc
aagggcctcgtcgtctcctcggagcacgacgagcccgtcacgatgtacctgcgcaagtcg
ggtgctggtgacgtcaccgccgccgacatcacgccgccggccggcgtcgaggtgcacaac
ccggacctcaagatcgccaccctctccgactccggcaagctggagatggagctcgtcgtg
gagcgtggccgtggctacgtctccgcggtgcagaacaagggcggcgacaacgagatcggc
cgcattccggtcgactcgatctacagcccggtcctcaaggtcacctacaaggtcgaggcc
acccgagtcgagcagcgcaccgacttcgacaagctggtcatcgacgtcgagaccaagccg
tcgatccgtccccgtgacgccatcgcctcggccggcaagaccctggtcgagctcttcggc
ctggctcgcgagctgaacgtcgaggccgagggcatcgacatcggcccgtcgcccgtcgac
gagcagctggctgccgacctcgccctcccggtcgaggacctgcagctgacggtccgttcc
tacaactgcctcaagcgcgagggcatccacaccgtgggtgagctcatcggtcgctcggag
caggacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggccaag
ctggtcgagatgggtctgtccctcaaggacagcgcgcccgggttcgacccgcacgcggcc
ctggctgcgtactcggacgacgacgacgcgtcgtacgtcgaggacgagcagtactga
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