Nocardioides jishulii: FCL41_13960
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Entry
FCL41_13960 CDS
T06163
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
noi
Nocardioides jishulii
Pathway
noi02024
Quorum sensing
noi03060
Protein export
noi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
noi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
FCL41_13960 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FCL41_13960 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FCL41_13960 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
noi02044
]
FCL41_13960 (secD)
Secretion system [BR:
noi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
FCL41_13960 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
QCX28509
LinkDB
All DBs
Position
complement(2942251..2944527)
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AA seq
758 aa
AA seq
DB search
MSRAAWIRFVLVLGLLAGCAALALNKEPTLGLDLKGGVSVTLQTYDSPNGTKANAENTDR
TKAVLEQRVNALGLSEPNIVRSGENRIIVELPGVKDADEAAEQLGQTAQLTVHPVVAGSI
TDKDQKPSKKGNRIVESDTPGEGYLEIGPTALEGEDITGAQPGQPQGTEWVVDVDFSRAG
SKKFSDLSAAAACAEGDQRRIAIVLDNKVISAPEVQVPCGSSIQGGTQISGGFTVDEVNE
LAALIEGGSLPLEVKPIDVRFAGPTLGKQAIDDSIWAGVVGIALTGLFIVAVYRFVGLMA
TLALASYALLAYAMLIALGSTLTLPGLAGFVLAIGMAIDANVLVFERAREEYAAYPSAGL
RRALMVGFNKAWSAIIDSNVTTLLAAGLLFFLGSGPIKGFGVTLTIGVIASMISALIIAR
VLTEVGVSNKWISKHPAVTGIGDIGRVRKWLDRKNPDLMKGRRNWLALSGVVTVIALSGI
FVNGLNLGVEFAGGRVLEYSTQKTVTADDAREALANADVNDVASVQETDGGKILVRTGTI
SGEEAQQVQDVIATIGGTADLERDEKISASFGKELRDRALIAFGVAFLAQLLYLAVRFKW
TFGVSAVIAMMHDVAIVVGLFAWLGKPIDGIFLAAAMTIIGLSVNDTVVVFDRIRERWRG
SKPTDTFAAQANKAAVETLPRTVNTGLGTMFILAALAIIGGDSLRDFSIALLVGLVVGTY
SSVFVATPLVTYLQQKWPMAKEKAQKATIERDDSGAVV
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtgctgcttggattcgcttcgtgctggtgctcggcctcctggccggctgtgct
gcgctggcgctcaacaaggaacccaccctgggcctcgacctgaagggtggcgtctcggtc
accctccagacctacgactcgcccaacgggacgaaggccaacgcggagaacaccgaccgc
accaaggccgtcctcgagcagcgcgtcaacgccctcggcctctccgagcccaacatcgtc
cgctccggtgagaaccgcatcatcgtcgagctcccgggcgtcaaggacgccgacgaggcg
gccgagcagctgggccagacggcacagttgaccgtccacccggtcgtggcgggttcgatc
accgacaaggaccagaagccctccaagaagggcaacaggatcgtcgagagcgacaccccg
ggtgagggctacctcgagatcggccccaccgccctggagggtgaggacatcaccggcgcc
cagcccggtcagccgcagggcaccgaatgggtcgtcgacgtcgacttcagccgcgcgggc
tcgaagaagttcagtgacctctccgctgctgccgcctgcgccgagggcgaccagcgccgc
atcgcgatcgtgctcgacaacaaggtgatctccgcccccgaggtgcaggtcccgtgtggc
tcctccatccagggcggcacccagatcagtggcggcttcaccgtcgacgaggtcaacgag
ctcgcggccctgatcgagggtggttcgctgcccctcgaggtcaagccgatcgacgtccgt
ttcgccggcccgaccctgggcaagcaggccatcgacgactccatctgggccggtgtcgtc
ggtatcgccctcaccgggctcttcatcgtcgccgtctaccgcttcgtcggcctgatggcc
accctggcgctcgcgtcgtacgccctgctcgcctacgcgatgctgatcgcgctggggtcg
acgctgacactgcccggcctcgccggattcgtgctcgcgatcggcatggcgatcgacgcc
aacgtactcgtcttcgagcgcgcccgggaggagtacgccgcgtacccctccgccgggctg
cgtcgcgccctgatggtcggcttcaacaaggcgtggagcgcgatcatcgactccaacgtc
accacgctgctcgcagccggcctgctcttcttcctcggctccggacccatcaagggcttc
ggtgtcaccctgaccatcggtgtcatcgcctcgatgatctccgcgctgatcatcgcgcgg
gtgctgaccgaggtcggtgtctccaacaagtggatctccaagcaccccgcggtcaccggc
atcggtgacatcggccgggtgcgcaagtggctcgaccgcaagaaccccgacctgatgaag
gggcgccgcaactggctggccctgtccggtgtcgtcaccgtcatcgcgctgtcgggcatc
ttcgtcaacggcctcaacctcggcgtcgagttcgccggtggccgggtcctggagtactcc
acgcagaagacggtgaccgccgacgacgcgcgtgaggcgttggccaacgccgacgtcaac
gacgtggcctcggtccaggagaccgacggcggcaagatcctcgtccgcaccggcaccatc
tccggtgaggaggcgcagcaggtgcaggacgtcatcgccacgatcggcggcacggccgac
ctcgagcgcgacgagaagatcagtgcgtccttcggcaaggagctgcgcgaccgggcgctg
atcgccttcggcgtggcgttcctggcgcagctgctctacctcgccgtccgcttcaagtgg
accttcggtgtctccgccgtgatcgcgatgatgcacgacgtcgccatcgtggtcggcctc
ttcgcgtggctcggcaagcccatcgacggcatcttcctggccgcggccatgaccatcatc
ggtctgtccgtcaacgacacggtcgtcgtcttcgaccgcatccgcgaacgctggcggggc
tccaagccgaccgacaccttcgccgcgcaggccaacaaggcggcggtggagacgctcccg
cgcacggtcaacaccggtctgggcacgatgttcatcctggcggccctggcgatcatcggt
ggcgactcgctgcgcgacttctcgatcgccctgctggtcggtctggtcgtcggtacctac
agctcggtcttcgtggcgacgccactggtcacctacctgcagcagaagtggccgatggcg
aaggagaaggcccagaaggccacgatcgagcgcgacgactcgggcgccgtcgtctga
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