Nocardioides jishulii: FCL41_15410
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Entry
FCL41_15410 CDS
T06163
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
noi
Nocardioides jishulii
Brite
KEGG Orthology (KO) [BR:
noi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noi03032
]
FCL41_15410 (topA)
03400 DNA repair and recombination proteins [BR:
noi03400
]
FCL41_15410 (topA)
Enzymes [BR:
noi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FCL41_15410 (topA)
DNA replication proteins [BR:
noi03032
]
Prokaryotic type
DNA Topoisomerases
FCL41_15410 (topA)
DNA repair and recombination proteins [BR:
noi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FCL41_15410 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
HC2
MarR_2
Motif
Other DBs
NCBI-ProteinID:
QCX28759
LinkDB
All DBs
Position
complement(3232461..3235220)
Genome browser
AA seq
919 aa
AA seq
DB search
MAHKLVIVESPTKATKIGGYLGKGYVVESSIGHIRDLPQSAAETPAKIKDKPWGRLGVDV
DNGFEPYYVVPRDKKSHITKLKQLLKDADELFLATDEDREGEAIAWHLLDELKPKGIPVR
RMVFHEITEPAILEAAANPRDIDMDLVEAQEARRILDRLYGYEVSPVLWKKVMSGLSAGR
VQSVATRLVVDREKERMKFRVASYWDLDASFDGGAKADPRIFPAKLHSVDGKRVARGSDF
TQTGELKSDSVVHLDRNGAEALASALRETSYEVRSVESKPYRRSPYAPFRTTTLQQEAGR
KLGMSAQVTMSVAQRLYENGFITYMRTDSTTLSSAAVGAARDQVRELYGAEYLPDSPRTY
ASKVKNAQEAHEAIRPAGETFKTPAQTGLRGDQFRLYELIWMRTVASQMKDAVGHTVSVR
IGGTAADGRDVVFGSSGRVITFHGFLKAYVEGLDDTSKQRDDAETRLPDLEQGAAVSAAS
VSASGHETKPPSRFTEATLIKELEEREIGRPSTYASIISTIINRGYVYKKGTALVPAWIA
FSVIRLMEEHFPRQISYEFTAEMESILDEIAAGRKDRVSELGEFYWGSDRVKGLQPLVTG
LGDIDAREMATFPVGDPDSGIHLRVGRYGPYIEGPGDDGEPAGKRANVPEDLPPDELTVA
KAKELLANPAGEEVVLGQHPETGLTVVAKNGRYGPYVTELLPEDAKKSAKPRTSSLFKSM
SLDTVTLDQAVQLLSLPRVVGLGEDGVEITAQNGRYGPYLKKGTDSRTIDAEEKLLTITL
DEAEKIYAQPKARGRGAATAPLKELGNDPVSGQPIVVKAGRFGEYVTDGEYNATLRKDDT
VEAITLERAAELLQERRDKGPAKKGAKKTAKKTTKKAAAKKTTAKKAASKTAAKKTTAKK
ATSKSATKKTTKKAAAEKA
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
gtggcacacaagctggtcatcgtggagtcgccgaccaaggcgaccaagatcggtggatat
ctcggcaagggttatgtcgtcgagtcgtccatcggtcacattcgtgacctgccgcagagc
gccgccgagaccccggccaagatcaaggacaagccctggggtcgtctgggcgtcgacgtg
gacaacggcttcgagccctactacgtggtgccccgcgacaagaagagccacatcaccaag
ctcaagcagctcctcaaggatgccgacgagctcttccttgccaccgatgaggaccgcgag
ggagaggccatcgcctggcacctcctcgacgagctgaagcccaagggcatcccggtgcgc
cgcatggtcttccacgagatcaccgagcccgcgatcctcgaggctgccgccaacccgcgt
gacatcgacatggacctcgtggaggcccaggaggcgcgtcgcatcctcgaccgcctctac
ggctacgaggtctccccggtgctgtggaagaaggtcatgagcggcctctccgccggccgc
gtgcagtcggtcgcgacccgcctcgtggtcgaccgggagaaggagcggatgaagttccgc
gtcgcctcctactgggacctcgacgcctccttcgacggcggcgccaaggccgacccgcgg
atcttccccgccaagctccactccgtcgacggcaagcgcgtcgcccgcggctccgacttc
acccagaccggtgagctcaagtccgactccgtcgtccacctcgaccgcaacggcgcggag
gcgctcgcctccgcgctgcgcgagacctcgtacgaggtgcgctcggtcgagtcgaagccc
taccgccgctcgccctacgcccccttccgcaccaccacgctgcagcaggaggcgggccgc
aagctcggcatgagcgcgcaggtgaccatgtcggtcgcccagcgcctctacgagaacggc
ttcatcacctacatgcgtaccgactcgacgacgctgtcgtcggccgcggtcggtgcggcg
cgtgaccaggtgcgcgagctctacggcgcggagtacctgcccgacagcccccggacgtac
gcctccaaggtgaagaacgcgcaggaggcgcacgaggcgatccgccccgccggcgagacc
ttcaagacgcccgcccagaccggtctgcgcggtgaccagttccgtctctacgagctgatc
tggatgcgcaccgtcgcctcccagatgaaggacgccgtcggccacaccgtctcggtgcgg
atcggcggcaccgcggccgacggtcgtgacgtcgtcttcggctcgtcgggccgcgtgatc
accttccacgggttcctcaaggcgtacgtcgagggcctggacgacacgtccaagcagcgc
gacgacgccgagacccgcctgcccgacctcgagcagggcgcggccgtcagcgcggccagc
gtcagcgcgagcggccacgagaccaagcccccgtcgcgcttcaccgaggcgacgctgatc
aaggagctggaggagcgcgagatcggtcgcccctccacctacgcctcgatcatctccacg
atcatcaaccgcggctacgtctacaagaagggcaccgcgctggtcccggcgtggatcgcc
ttctcggtgatccgcctgatggaggagcacttcccccgccagatctcctacgagttcacc
gccgagatggagtcgatcctcgacgagatcgccgccggccggaaggaccgcgtcagcgag
ctgggcgagttctactggggctccgaccgggtcaagggcctgcagccgctggtcaccggc
ctcggtgacatcgacgcccgggagatggcgaccttcccggtcggcgaccccgactccggc
atccacctgagggtcggccgttacggtccctacatcgaggggcctggagatgacggcgag
cctgcgggcaagcgcgccaacgtgcccgaggacctgccgcccgacgagctcaccgtggcc
aaggccaaggagctgctcgccaaccccgccggcgaggaggtcgtcctggggcagcacccg
gagaccggcctgaccgtcgtcgcgaagaacggtcgctacggtccctacgtcaccgagctc
ctgcccgaggacgccaagaagagtgccaagccgcgcaccagctcgctcttcaagtcgatg
agcctcgacaccgtcaccctcgaccaggccgtgcagctgctcagcctgccgcgcgtcgtc
ggcctcggtgaggacggcgtcgagatcaccgcgcagaacggtcgctacgggccctacctg
aagaagggcaccgactcccgcaccatcgacgcggaggagaagctcctcacgatcaccctg
gacgaggcggagaagatctacgcccagcccaaggcacgtgggcgcggcgccgccacggct
ccgctgaaggagctcggcaacgacccggtctccggccagccgatcgtggtcaaggcgggt
cgcttcggtgagtacgtgaccgacggcgagtacaacgccaccctgcgcaaggacgacacc
gtcgaggcgatcaccctcgagcgggcggccgagctgctgcaggagcgccgcgacaagggg
cccgcgaagaagggcgccaagaagacggcgaagaagacgaccaagaaggccgccgcgaag
aagacgacggccaagaaggcggcgtcgaagaccgcggcgaagaagacgacggccaagaag
gccacgtccaagagcgcgacgaagaagacgacgaagaaggctgcggccgagaaggcctga
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