Nocardioides jishulii: FCL41_16205
Help
Entry
FCL41_16205 CDS
T06163
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
noi
Nocardioides jishulii
Brite
KEGG Orthology (KO) [BR:
noi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
noi03016
]
FCL41_16205 (thpR)
Enzymes [BR:
noi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FCL41_16205 (thpR)
Transfer RNA biogenesis [BR:
noi03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FCL41_16205 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Emfourin
Motif
Other DBs
NCBI-ProteinID:
QCX28894
LinkDB
All DBs
Position
3410766..3411329
Genome browser
AA seq
187 aa
AA seq
DB search
MRCFVAVVPPPVALDHLDDFLEPRRAAADFRWTAPDQVHLTLAFIGDLAERRLDDLVERL
ERAASRRRTTSTAITGGGAFPHAAGAKVLWAGLDLDEDDAVEVRRMADGARAAANRAGAK
VAGQRFRPHLTVARCGRPTEVSSWVKLLDAYRGPEWTIDAFTLVESHLGEGPRGRPRYEV
VADFPLG
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgcgctgcttcgtcgccgtcgtcccaccccccgtcgccctcgaccacctggacgacttc
ctggagccgcgccgcgcagccgctgacttccgatggaccgctcccgaccaggtgcacctg
accctcgccttcatcggcgacctcgccgaacgccgtctcgacgacctggtcgaacggttg
gagcgggcggcgagcaggcggcgtacgacgtcgacggcgatcaccggcggaggcgccttc
ccccacgcagccggcgcgaaggtgctgtgggccgggctcgacctggacgaggacgacgcg
gtggaggtacgccggatggccgacggcgcccgggccgccgccaaccgcgcaggggcgaag
gtggccgggcagcgcttccgcccgcacctcaccgtggcgcgctgcgggcggcccaccgag
gtgagcagctgggtgaagctcctggacgcctaccgcggaccggagtggacgatcgacgcg
ttcacgctcgtcgagtcacacctcggcgaggggccgcgtggccgcccgcggtacgaggtc
gtggctgacttcccgctcgggtga
DBGET
integrated database retrieval system
