Nonlabens ponticola: EJ995_03425
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Entry
EJ995_03425 CDS
T05856
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
noj
Nonlabens ponticola
Pathway
noj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
noj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EJ995_03425 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
noj03019
]
EJ995_03425 (recQ)
03400 DNA repair and recombination proteins [BR:
noj03400
]
EJ995_03425 (recQ)
Enzymes [BR:
noj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EJ995_03425 (recQ)
Messenger RNA biogenesis [BR:
noj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EJ995_03425 (recQ)
DNA repair and recombination proteins [BR:
noj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EJ995_03425 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Peripla_BP_4
Helicase_Sgs1
GerE
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AZQ43333
UniProt:
A0A3S9MW38
LinkDB
All DBs
Position
complement(755170..757329)
Genome browser
AA seq
719 aa
AA seq
DB search
MSTQKLEILKKHFGYDSFRLLQEEIIDDVLAGKDLMVVMPTGGGKSMCFQLPSLMLDGVT
LVISPLIALMKDQVDALKANGIAAAFFNSTQDAAQQEDLYRQLAAGALQLIYVAPESISL
LNNHLQQATVSLIAIDEAHCISTWGHDFRPAYTQLAYLKTSYPQAPLIALTATADRATRA
DIKKQLAIAHAGEYVSSFDRPNIRLEVRPGNNRLTQIQRFLKNYQDQSGIIYCLSRKTCE
SIAGKLSASGYSVAAYHAGLEASFRESIQEQFIEDEIKIVVATIAFGMGIDKSNVRFVIH
YNMPKNIEGYYQEIGRAGRDGIDSHALLFHSYADVIQLRRFADGSGNAQVQIAKLERMKQ
FAEALTCRRRMLLSYFNEYLEEDCGNCDVCLNKPDFFDATTNAQKALSALLRTGERVSLN
LLIDLLRGAQNATVMESGFQGIKTYGAGGDTSWNDWQQYIIQMINQGLMEIAFHEQNHLK
VTAQGKEVLFDGREVSLAVIPKASDIANKKIAQANAIPSRANEELFLALKSLRTQLAEKE
QIAPYMIFSDATLTDIATRIPLDDNEFADVTGVGSHKHDQYGPAFLKLMEDYKDARDGEF
IYRDMMPKPKKKKKSPKKDTVMESVRAFWDGKTVQEIATARELAPTTILSHLSKRFTSHG
DVDIKKLIDTADLELIEKAYPQFENDTALKPLYEHLDGKIDYGTLRLGIAIVSTKTTSV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgagtacacaaaaattagaaattctcaagaaacattttggttatgatagcttcaggcta
ctgcaggaagaaatcatcgatgatgtcctagccggtaaggacctgatggtcgtcatgcct
accggtggtggtaaatccatgtgtttccagctgccatccctgatgctagacggcgtcacg
ctggtaatttcaccactcatcgcgctaatgaaggatcaagtggacgccttaaaggctaat
ggtatagccgctgcctttttcaatagcacacaagatgctgcacagcaagaagatctttat
cgacaactggccgctggtgcactgcaattgatttatgtggcgccagaaagtatctcgctt
ttaaacaatcatttacaacaggcgactgtatcactcatcgctattgatgaagctcattgt
atttccacttggggtcatgattttagaccagcttatacccaactagcttacttaaaaacc
agctatccgcaagcgccgctcatcgcacttaccgctaccgcagatcgtgccacacgtgca
gacatcaaaaaacaactggccattgcccatgctggtgagtacgtctcttcttttgacagg
cccaacatcaggcttgaggtacgtcctggcaataatcgactcacgcaaatacagcgattt
ctcaaaaattatcaagatcaatctggcattatttattgcttgagccgcaagacctgtgag
agcattgcaggtaagttgagtgctagtggatactctgtcgcggcataccatgccggattg
gaagctagctttcgcgaaagcatacaggaacaatttattgaagacgagataaagatcgta
gtggcgaccatcgcttttggaatgggaatcgacaaatcaaacgtgcggtttgtgatccat
tacaatatgcctaaaaatattgaaggctattatcaggaaataggtcgcgccggtcgcgat
ggcattgatagtcatgcattgttgtttcacagctatgcagatgtgatccagctgcgacgc
tttgcagatggtagcggcaatgcacaggtacaaatcgcaaaactggaacgcatgaaacag
tttgccgaggcacttacttgccgcagacgcatgctgctgtcctattttaatgaatatcta
gaagaagactgcggcaattgcgatgtttgccttaacaagccagacttttttgatgctact
acaaatgcgcaaaaagcactaagtgccttgctgcgcacaggcgagcgcgtctcgcttaat
ctacttatcgatctactgcgcggcgcacaaaacgctaccgtcatggaaagcggctttcaa
ggaatcaagacctatggcgctggtggtgataccagctggaacgactggcaacaatacatc
atacaaatgatcaatcaaggcctgatggaaatagccttccacgagcagaatcatctgaaa
gtaaccgcacaaggaaaagaagtgttatttgatggtagagaggtttcgctagccgtaata
cctaaagctagcgatattgcaaataaaaaaatcgctcaggccaatgctatcccttctagg
gccaacgaggaattgttcctcgcactcaagagcttgagaacccagctagcagaaaaagag
caaatcgcgccctacatgatttttagcgacgcgacactcacagacattgccaccagaata
cctctagacgacaatgaatttgcagatgttaccggtgttggttcacacaaacatgatcag
tacgggcctgcttttctcaaattaatggaagactataaagacgctcgtgacggcgaattt
atctatcgcgatatgatgcccaaacccaagaagaaaaagaagtcacccaaaaaagatacc
gtcatggaatctgtaagagctttctgggatggaaaaacagtacaagaaatagcgactgca
cgtgagctggcacctaccaccatcttatcgcatttatcaaaacgttttacctcacacggt
gatgttgatatcaagaaattgatcgacaccgcagacctagagctcatagaaaaagcctat
ccacaatttgagaatgataccgcactcaaacctttatatgaacacctagatggtaagatt
gactatggcacattgcgattgggcatcgccattgtaagtacaaaaactaccagtgtatga
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