Nonlabens ponticola: EJ995_04445
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Entry
EJ995_04445 CDS
T05856
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
noj
Nonlabens ponticola
Pathway
noj03030
DNA replication
noj03430
Mismatch repair
noj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
noj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EJ995_04445
03430 Mismatch repair
EJ995_04445
03440 Homologous recombination
EJ995_04445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noj03032
]
EJ995_04445
03400 DNA repair and recombination proteins [BR:
noj03400
]
EJ995_04445
Enzymes [BR:
noj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EJ995_04445
DNA replication proteins [BR:
noj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EJ995_04445
DNA repair and recombination proteins [BR:
noj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EJ995_04445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
AZQ43518
UniProt:
A0A3S9MWE1
LinkDB
All DBs
Position
973680..978032
Genome browser
AA seq
1450 aa
AA seq
DB search
MYLIFDTETTGLPKRWDLPYTEVDNWPRVVQIAWQLHDGLGNMIDHQDYLIKPDGYDIPY
DSEQIHGISTALAQDQGLPLQEVLAKFNDALAMTTFVVGHNLEFDLNVTGAEFIRANIAN
DLHKLPVLDTCTEDTARLCQIPGGRGGKFKLPTLTEIYKFLFNQEFSEAHNATADVEATT
RVFLELIRQQQFSLASLKQAAGYFVSFRESNPTTIQPAGIEHVNLKKASARLATSSSNQI
TDQEIEENLDELSSAPFAHLHNHSQFSILQSTASVQDLVHAAAANDMPAVAMTDHANMMG
AFHFVKAVKSYNASLTSDENMQEKKPIKAIIGCEFQVCEDMYDKSFKDNGYQIVLLAKNK
NGYHNISKMSSLAYTEGFYYVPRIDKKLIEQYKEDIIVLTGNLYGEVPSKILNIGEKQAE
EALIWWKEQFADDLYVELMRHDQEDEQRANAVLIDLARKHDVKLVATNNTYYIHKEDANA
HDILLCVKDNEKQATPIGRGRGYRYGLPNQEYYFKSSDEMKQIFKDLPEAILNVAEVVDK
IESYELARDVLLPKFDIPAEFIDERDEHDNENRGENAYLRHLTYEGAAKRYGELTDEIKE
RLDFELQTIKKTGYPGYFLITWDFIKAAREMDVAVGPGRGSAAGSAVAYCLWITNVDPIH
YDLLFERFLNPDRVSMPDIDIDFDDENRGKVMDYVIEKYGSDQVAQIITYGTMAAKSSIR
DTSRVLDLPLGDADRIAKLIPDFAKLKKIFALEPNKISGAFRSDDAEMVRELIQISEGTD
LAAETLKQARILEGSVRNTGVHACGVIITPDALTNFVPIATAKNSDLYVTQFDNNVVESA
GLLKMDFLGLKTLSQIKDTVAIIKERHGMELDIEAIPLDDDKTYELFQRGETVGIFQYES
AGMQKYMRDLKPTQFADLIAMNALYRPGPLEYIPDFIDRKHGRKEITYDLPAMEEYLEET
YGITVYQEQVMLLSQKLANFSKGDADVLRKAMGKKQMATLQKMKPQFLDAGEGNGHDREI
LEKVWKDWEAFASYAFNKSHSTCYAWIGYQTAYLKANYPAEFMAATLSNNMNQIKDVTKF
MDECRRMGLDVLGPDVNESNYKFTVNKNGAVRFGMGAVKGLGHSAVMTIIENRKEAPYHS
IFDMAKRIDLRAANKKSFEALALSGGFDGLGGDNRAQFFHTSDNGQIFLESVVKYAQRFQ
ENENSAQVSLFGEASEVQIPEPQLPICEEWGTMEKLKREKEVVGIYISGHPLDDYKKEIE
FFCNSNLESLQDLNLVVNRELSFCGVITECQHRMTKANKPWGTFVLEDYKDTYEFRMFNE
EYLKFRHFLVPNTFLHARIKVQQGWIDKNTGKPRDPRINFLEMQQLQDVMTGAAQSLTIQ
LHASEVMEKRVEMLKEVLEKHRGDHHLYFNLKDYEEKISINMSSKLQKVNVTAELLEILD
KEDISYNVNQ
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgtacctaatatttgataccgagactactggactgcctaaacgttgggatcttccctat
actgaagttgataactggcctcgagtagttcaaattgcatggcaactgcatgacggtcta
ggtaacatgattgaccaccaagattaccttataaaacctgatggttatgatattccttac
gattcagagcaaatccatggtatctctaccgcactagctcaagatcaaggattacccttg
caagaagtgctggcaaaattcaatgatgcactggcgatgaccacctttgttgtgggtcac
aacctagaatttgaccttaacgtcactggtgcagaatttatacgtgctaacattgcaaac
gatctacacaaattgccggtacttgatacctgtactgaagatactgcgagattatgccag
attccaggtggccgtggcggtaagttcaaactgcctacacttactgagatctacaagttt
ctgtttaatcaggaatttagcgaggcacacaatgccactgcagatgttgaggcgactact
agggtattcctagagctcataaggcaacaacaattctcgctagctagtttaaagcaggca
gctgggtactttgttagctttcgcgaaagcaacccaaccaccatccaacctgcaggcatc
gagcatgtgaacttgaaaaaggcatctgcacgcctggcaacaagttcctcaaaccagatt
accgatcaagaaattgaagagaatctggacgagttgagtagcgcgccatttgcccattta
cacaaccacagtcaattctcgattttacaatctacagccagcgttcaagatctagtacat
gccgcggcggctaatgatatgccagccgttgccatgacggaccatgccaatatgatgggc
gcctttcattttgtaaaggcggtgaaatcatataacgccagtctcacatcagacgagaac
atgcaagaaaagaaacctatcaaggctatcataggttgtgagtttcaagtttgtgaggac
atgtatgataagtcttttaaagacaatggttatcaaatagtgctgcttgccaaaaacaaa
aatggctaccacaacatttccaaaatgtcgagtctagcttacacagaaggcttttactat
gtgcctcgcattgataaaaagttgatcgagcagtacaaggaagatattattgtgctgaca
ggaaacttgtacggcgaggtaccatcaaaaatcctaaacataggagagaagcaggcagaa
gaagcactcatctggtggaaagaacagtttgcagatgatttgtatgtagaactcatgcgt
catgatcaagaagatgaacagcgtgcgaatgcggttctcattgatctagctcgcaaacac
gatgtaaagctggtcgctacaaacaacacctattatatacataaggaagatgccaatgca
cacgatattttattatgtgtcaaggataatgagaagcaggccacacctataggtcgcggt
cgcggttatcgctatggattgcccaatcaggagtactacttcaagtccagcgatgagatg
aagcaaattttcaaggatctgcccgaggctattttaaacgttgctgaggtagtagataag
atcgaatcctatgaactggcacgcgatgttttgctacccaagtttgatatccctgcagag
ttcatcgatgagcgcgatgagcacgataatgagaatcgtggtgagaatgcctatttgaga
catcttacctatgaaggtgcggcaaagcgttatggcgagctgactgatgaaataaaggaa
cgactagattttgagttacaaaccatcaagaaaaccggttatccaggttatttcttgatt
acttgggactttataaaagccgctagagaaatggatgtggccgtaggtccaggtcgtgga
tctgctgctggtagtgcggtggcgtactgcttatggattacaaatgttgatccaatacat
tacgatctactttttgagcgtttcttgaatccagatcgtgtatcgatgcccgatattgac
attgactttgacgatgagaatcgtggtaaggtcatggattacgtcatcgagaagtatggt
agcgatcaagtcgcgcaaatcatcacttatggtaccatggcggcaaaatccagcatacgc
gatacttctcgcgtactcgatttacctctaggcgatgccgatagaatcgcaaagctgatt
ccagattttgccaaactcaaaaagatttttgcgttagaacctaacaagataagcggcgct
ttccgtagtgatgatgcagagatggtgcgcgaacttatccagataagtgaaggcacagat
cttgctgccgagaccttgaaacaagctagaatcctagaaggatctgtgcgcaatacaggc
gtgcatgcctgtggtgtgattatcacaccagatgcgctgaccaattttgtacctatcgcc
actgccaaaaactctgacctgtacgtcacgcagtttgacaacaacgttgtggaaagcgct
ggcctgcttaaaatggacttcttgggactcaaaaccttaagtcagattaaggatacggta
gctattataaaagagcgccatggaatggaactcgatatagaagccataccgctggatgat
gataagacctatgagctatttcagcgaggtgagaccgttggaatatttcaatatgaaagt
gctggtatgcaaaagtacatgcgtgatctaaagcctacacagtttgccgacttgattgcc
atgaatgccttgtatcgtcctggaccactagaatacattccagactttattgatcgcaag
catggtcgcaaagagatcacttatgacctgccagcgatggaagaataccttgaggaaacg
tatggtatcacggtttatcaagagcaggtaatgctactatcacaaaagctggcaaacttc
tccaaaggtgatgcagatgttttgcgtaaagccatgggtaaaaagcagatggcaacactg
cagaagatgaaaccacaattcctagatgctggtgaaggcaacggccatgatcgcgagata
ctggaaaaggtatggaaagactgggaagcctttgcatcctatgcctttaataaatcgcac
tcgacttgctatgcgtggataggttaccaaacggcctatttaaaggccaattatccagca
gagttcatggcggcaacgctgtcaaataacatgaaccagatcaaggacgtgaccaagttc
atggacgagtgtcgccgcatgggactggatgttttggggcctgacgtgaatgagtcaaac
tataagtttactgtaaataagaatggtgcagtgcgatttggaatgggtgcggtaaaaggt
ctaggtcatagtgctgtcatgaccattattgagaacaggaaagaggcgccataccacagc
atctttgatatggccaaacgcattgatttacgcgcggctaataaaaagtcttttgaagca
ctcgctttaagcggtggatttgatggtttaggtggtgacaatcgcgctcagttttttcat
accagcgataatggtcagatattcctggagtcagtagtcaagtatgcacagcgatttcag
gagaatgagaacagcgctcaggtcagcctttttggagaagctagtgaggtgcaaatacca
gagccgcaattgcctatttgtgaagaatggggcacgatggaaaagctcaaacgagagaaa
gaggttgtgggcatttacatatctggtcatccactagatgattataaaaaggagatagaa
ttcttctgcaattctaaccttgagagcttgcaggacttaaatttagtcgtgaatcgagag
ctcagtttttgtggtgtaattacagagtgccagcaccgcatgaccaaggccaacaaacct
tggggaacgtttgttctcgaggattataaggatacgtatgaattccgcatgtttaatgag
gagtatttaaaatttagacactttctcgttcctaatacctttttgcatgcacgcatcaag
gtgcaacaaggctggattgataagaacacaggcaagccacgtgatccacgcatcaacttc
ttggagatgcagcaattacaggatgtcatgacgggcgctgcgcaatccttgaccatccag
ttacacgctagcgaggtgatggagaaacgggtagagatgctcaaggaagtgttggagaaa
catcgtggcgatcaccatttatattttaacctcaaagattatgaggagaaaatatctatc
aacatgtccagcaagctgcaaaaggtgaacgtcactgcagagttgctggagattttggat
aaagaagacatcagctataatgtgaatcagtaa
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