Nonlabens ponticola: EJ995_05880
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Entry
EJ995_05880 CDS
T05856
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
noj
Nonlabens ponticola
Pathway
noj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
noj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EJ995_05880 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
noj03019
]
EJ995_05880 (rny)
Messenger RNA biogenesis [BR:
noj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EJ995_05880 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
UPF0154
Motif
Other DBs
NCBI-ProteinID:
AZQ43779
UniProt:
A0A3S9MXC1
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Position
1314032..1315606
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AA seq
524 aa
AA seq
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MDTTTIIAAVVALIIGLAVGFFIAKSIVEKGKASQLIADAKKEAASIVKDAEVEGEKIKS
EKTYRAKEKFIELKAKHEKEIMQREKKIGDSEKRTRDKESKVSSELANSKKLNQSLESKQ
KDLDEKRSAILKKQEETEKMHQQQIKQLEVISGMSGEDAKKQLVESLKDTARTEAMSIVQ
STIEEAKLTAQQEARKVIINTIQRIGTEEAVENCVSVFNLESDDVKGRIIGREGRNIRAI
EAATGVEIIVDDTPDAIILSCFDAVRREVARLSLHKLVTDGRIHPARIEEVVRKTRKQID
QEIAEVGKRTVIDLGIHGLHPELIKMVGRMKYRSSYGQNLLQHSREVAKLCGTMASELGL
NPKLAKRAGLLHDIGKVPETEDETPHAILGMKLAEKHGEKGEVCNAIGAHHDEIEMTSLL
SPIVQVCDAISGARPGARRQVLDSYIQRLKDLEDIAFGFNGVEKAYAIQAGRELRVMVES
EKISDEKAGQLSFEISQKIQTDMTYPGQVKVTVIRETRAVNIAK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggatacaacaactatcatagcggccgtagtcgctcttattataggtctagcagtaggc
ttttttattgcaaagtcaatcgtcgagaaaggcaaggcctcacaactcatcgcagatgct
aaaaaagaggcagcatcaatagtcaaagatgccgaggtggaaggcgagaaaatcaaatct
gaaaaaacatatcgagccaaagaaaaatttattgagctcaaggcaaagcatgagaaagaa
atcatgcagcgcgagaagaaaataggcgacagcgagaaacgcaccagagataaggagtct
aaggtttctagcgaactagccaacagcaagaaactcaaccagtcgctagagagcaagcaa
aaagatcttgatgagaagcgtagcgctattctcaagaaacaagaagagactgaaaagatg
caccagcagcaaatcaagcagcttgaggtaatcagtggtatgtctggagaagatgctaaa
aaacagctagtagaatcgcttaaagacactgcgcgtaccgaggctatgtctattgttcaa
agcactattgaagaggcaaagcttaccgcacaacaagaagctcgcaaggtgatcatcaat
accatacaacgcataggaactgaagaagcagttgaaaactgcgtatcagtattcaatcta
gaaagtgacgatgtcaagggacgtatcattggtagagaaggacgtaacattagagctatt
gaagccgctactggtgtagaaattattgtggatgatactccagatgctatcatactttct
tgttttgatgcagtgcgtcgcgaggtagctagactatcactacacaagttggtgactgat
ggtcgtattcacccagcacgtattgaagaagtagtgcgcaagaccagaaagcagattgat
caagaaattgctgaggtaggaaaacgtacggtaatcgatttaggaattcatggtttacat
ccagaattgatcaaaatggtaggacgtatgaagtaccgttcatcttatggtcaaaaccta
ttacaacacagccgcgaggtggcaaagttatgtggtaccatggcatcagaattagggttg
aaccccaaacttgccaagcgcgctggactgttacatgatataggtaaagtacctgaaact
gaggatgagactccacacgcaatcctaggaatgaaactagctgaaaaacatggtgaaaaa
ggagaagtgtgcaacgctattggtgctcaccacgatgagatagagatgacatccttattg
tcacctattgtgcaggtatgtgacgcgataagcggcgcgagaccaggcgcgagacgtcag
gtgttagattcttacatccagcgattgaaagatcttgaggatatagcttttgggtttaat
ggtgttgagaaagcttatgctatccaagcaggtagagaattgcgagtaatggtagaaagt
gaaaaaataagtgatgagaaagctggacaactatcttttgagatttcacaaaaaatccag
accgatatgacttatccaggtcaggtaaaggtcaccgttatacgagaaaccagagcggta
aacattgctaagtaa
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