KEGG   Nonlabens ponticola: EJ995_06140
Entry
EJ995_06140       CDS       T05856                                 
Name
(GenBank) DNA topoisomerase IB
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
noj  Nonlabens ponticola
Brite
KEGG Orthology (KO) [BR:noj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:noj03032]
    EJ995_06140
   03400 DNA repair and recombination proteins [BR:noj03400]
    EJ995_06140
Enzymes [BR:noj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     EJ995_06140
DNA replication proteins [BR:noj03032]
 Prokaryotic type
  DNA Topoisomerases
   EJ995_06140
DNA repair and recombination proteins [BR:noj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      EJ995_06140
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: AZQ43828
UniProt: A0A3S9MXG3
LinkDB
Position
1368171..1369259
AA seq 362 aa
MTLTPEQIREALTQPEMAAHLADLVYIQDEHLSIHRKKHGRGFTYLINNTERVKDKEELK
RIKSLVIPPAWQDVRISSVANGHLQSVGRDDKGRKVYRYHDLWSLLRNQTKFFKMSAFAK
ALPKIRKRLESDLALKGMPREKCLALVVTVMDLTHIRVGNQYYARKNKTYGLSTLRTKHV
EDDGDGVTFNFKGKKGVQQSHTITDEEIVELIHQCEEIPGWELFQYIDKDGSHHGIDSGM
INDYIHEVAGDIFSAKDFRTWGATTTFFEKMLELPVPETKKQRDKNMLEGYDAAAEELGN
TRNVCRQYYVHPEIPNVYEEEDKFEQYRKKVKDYNDYKRFTAAERCVQEIIENFEIEFKL
ED
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgacattgacaccagaacaaatacgcgaggcactgacccagcctgaaatggccgcacac
ctagcagatctggtgtacattcaagatgagcacctgagcattcatcgcaagaaacacggt
cgtggtttcacctatcttatcaacaatacagagagagttaaggataaagaagaactcaag
cgtatcaagtcgctggtaataccgccagcgtggcaagatgtgcgtatctccagtgtggca
aacggtcacttgcaatctgtaggtcgtgatgacaaaggccgcaaggtgtatagatatcat
gatttgtggagtcttctaagaaaccagacaaagttttttaagatgtccgctttcgcgaaa
gcgttacccaaaataagaaagcgattagaaagtgacctagcattaaaaggaatgcctcgt
gaaaagtgtctagcgctggtagtgactgttatggatctaacacacatacgtgttggcaat
caatattatgcgcgcaaaaacaaaacttatggactctctaccctacgcactaagcatgta
gaagatgatggtgacggcgtgacctttaattttaagggtaaaaagggcgtgcagcaatca
cacaccattactgatgaagaaatcgtagagctaatacaccagtgcgaggaaattccgggt
tgggaattgtttcaatatatcgataaagatggatcgcatcatggtatcgatagcggtatg
atcaatgattatattcatgaggttgctggtgatatttttagcgccaaggattttagaact
tggggcgcgaccactactttttttgagaagatgctggaattgccagtgccagaaacaaag
aaacaacgcgataaaaatatgctagaaggatatgatgctgctgcagaagaattaggaaac
acacgcaatgtgtgtcgtcaatattatgtgcatcctgagattcccaatgtgtacgaagag
gaagataaatttgagcagtaccgtaaaaaggtaaaagattataacgactacaaacgcttc
acggcagccgagcgttgcgtgcaggaaatcattgagaactttgagatcgagttcaagctg
gaagattaa

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