Noviherbaspirillum sp. UKPF54: FAY22_00260
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Entry
FAY22_00260 CDS
T06116
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
nok
Noviherbaspirillum sp. UKPF54
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nok03036
]
FAY22_00260 (xerD)
Chromosome and associated proteins [BR:
nok03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
FAY22_00260 (xerD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
QDZ26533
UniProt:
A0A5B8N135
LinkDB
All DBs
Position
50578..51495
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AA seq
305 aa
AA seq
DB search
MTEGVVAAPAAGRDAIDEFCDTLWLEDGLAKNTLDAYRRDLSLFADWLMVERGKPLYAAA
TDDLNAYFAARHAGTKATSANRRLAALKRFYQLALRQNKISTDPCLKLKSAKQPPRFPKT
LSEMQVDALLAAPDVNTPLGLRDRTMLELMYASGLRVSELVLLKTIELGMNEGVLRITGK
GGKTRLVPFGEEARSWIERYLQQGRSAILGGQVDDALFVTGRGGAMTRQMFWTLIKKYAL
RAQINAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKKLHAQ
HHPRG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgacggagggcgtcgtagctgcgcccgcggccggtcgggacgcgatcgatgaattctgc
gacacgctgtggctggaggacggtcttgccaaaaacacgctcgacgcctaccggcgcgac
ctgagcctgtttgcggactggcttatggtcgagcgcggcaagccgctgtacgcagcggcg
acggacgacctgaacgcctatttcgcggcgcgccatgccggcaccaaggcgacctccgcc
aaccggcgccttgccgcgttaaaacgcttctaccagctcgcgctacggcagaacaagatc
agcaccgatccctgcctgaaactgaaatcggccaagcagccgccgcgctttcccaagacc
ctctccgagatgcaggtggacgcgctcttggccgcgcccgacgtcaacacgccgctgggc
ttgcgcgaccggaccatgctggaactgatgtatgccagcggcttgcgggtgtcggaactg
gtgttgctcaagacgatagagctgggcatgaacgaaggcgtgctgcgcattaccggcaag
ggcggcaagacgcggctggtgccgttcggcgaagaagcgcggtcctggatcgagcgctac
ctgcagcaggggcgttcggccatcctgggcggccaggttgacgatgccttgttcgtcacc
ggccgcggcggcgcgatgacgcgccagatgttctggacactgatcaagaagtacgcgttg
cgcgcccagatcaatgcgccactgtcgccccacaccttgcgccacgccttcgcgacgcat
ttgctcaatcatggcgccgacttgcgtgttgtgcaattgctgctggggcatgccgatatt
tcaacgacacaaatctatacgcatgtggcgcgcgagcgcctgaaaaagcttcatgcgcag
caccatccgcgcggctga
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