Noviherbaspirillum sp. UKPF54: FAY22_00470
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Entry
FAY22_00470 CDS
T06116
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok03030
DNA replication
nok03430
Mismatch repair
nok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAY22_00470
03430 Mismatch repair
FAY22_00470
03440 Homologous recombination
FAY22_00470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nok03032
]
FAY22_00470
03400 DNA repair and recombination proteins [BR:
nok03400
]
FAY22_00470
Enzymes [BR:
nok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAY22_00470
DNA replication proteins [BR:
nok03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAY22_00470
DNA repair and recombination proteins [BR:
nok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAY22_00470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF5710
Motif
Other DBs
NCBI-ProteinID:
QDZ26572
LinkDB
All DBs
Position
96662..97591
Genome browser
AA seq
309 aa
AA seq
DB search
MGRDSTSTKETISDALEVLEAHPDYRIIRRIVPRERYAESEAGMLLKAAIVDTETTGTNH
DQDKIIELGMVLFEYDPETGQAYRVLKTFNELEDPGFPIPPEATAVNGITDAMLAGKRID
DVAVEAFLEGVSLVIAHNSAFDRVFLEKRLPMFERLHWGCSLSQVSWREEGIGSAKLDYI
AFQNGLFYEAHRAEADCVALLEVLQQPLPKSGELALKAILKQSSEKSYRVFAIRSPFESK
DLLKGRGYRWDAERKCWHHTVTGAEAIKSEVAWLKDNVYDGRSVELEFEVLDGLTRFSSR
PGKKVMKQI
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgggaagagactcgacatcaacaaaagagacaatttcagatgcacttgaagtgctggag
gcgcatcctgattacaggataattcggcgaattgtcccgcgtgagaggtatgcagaatcc
gaagcaggcatgctactgaaggcggccattgtcgatacggagaccacgggaaccaatcat
gaccaagacaaaattattgagcttggcatggtgctgtttgaatatgacccggaaacaggc
caagcttaccgggtgctgaaaacgttcaacgaacttgaagaccccggcttcccgattccg
cctgaagccacagctgtcaatggcataactgacgccatgcttgcaggcaagcgcatcgat
gatgtagcggttgaggctttcttggagggagtgagtctcgtcattgcccacaactcagcg
ttcgaccgcgtgtttctggagaagagattgccgatgttcgagcgcctgcattggggatgc
tcattgtcgcaggtcagctggagagaagagggtattggtagcgcgaagcttgactatatt
gcgttccaaaacggacttttttatgaagcgcatcgagccgaggccgactgcgtggcttta
ctggaagttctgcagcaaccgctgccgaaatccggagagcttgcgttgaaagcaattctc
aagcaatcaagtgagaagagctatcgggtgtttgcaatcaggtctccatttgagtccaag
gacctgctcaaggggcgcggataccgatgggacgcagagagaaaatgttggcatcacaca
gtcaccggtgctgaggccatcaaaagcgaagtcgcctggctgaaggacaacgtctatgac
gggcgtagcgtggagctggaattcgaagtactagatggcctgacgcggttctcgagtagg
cctgggaaaaaggtaatgaaacaaatctag
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