Noviherbaspirillum sp. UKPF54: FAY22_04235
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Entry
FAY22_04235 CDS
T06116
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
nok
Noviherbaspirillum sp. UKPF54
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nok03009
]
FAY22_04235
Ribosome biogenesis [BR:
nok03009
]
Prokaryotic type
ribosomal protein modification factors
FAY22_04235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
QDZ27228
LinkDB
All DBs
Position
887010..889214
Genome browser
AA seq
734 aa
AA seq
DB search
MEIKVNFLDKLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCN
TRNIPTENIRLSQNNIVDPENRYKQIFKIQVELPPDISAHDRQGILRSIERCTVKKVVQT
GPEFVIEEVENLDADAQSLLTLKPAPDASTHILGKDLPLEQTIANMSGLLAGLGMKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGATKESALASALGEFIERLNCNHFYGGTFWGED
IGNAPFVHYPNERWFKPGRKDALPADILDEYCRPIYDPDGELRASHLIDTNSGNVKRGIC
SLPFVRQSDGEVVYFPSNLVENLYGSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEL
ALPDVPQDVLAKYPGILAGIQGLEEQGFPVLVKDASLGGKYPVMCVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDLPQPTFVSEAVTEPNNFVEHFIDSSGVVSWRF
FSAKANFEFVEWDFSGQGEKSNAEEAATLFGILKDMGKEAYMAVYDQLGAVACRILVPGY
SEIYPIEDLVWDNTNKALLFREDILNLHRLDDASLEALLERLDNNELDEYSDIATLIGIE
FDENTVWGQLTVLELKLLIHLALQQLEEAHELVGGFLQYNDNTVERRLFYQALDVVLEVL
LDDELELDDYVVNFRRMYGNPRMDAVLGSVDGSVRFFGLTPTSMKLEGLDRHHRLIDSYK
KVHAARGNVAATVG
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaaggtcaattttctcgacaagcttcgcctcgaagccaagtttgatgatttc
acggtggtggccgaccagcctatccgctacaagggagatggctcggcgcccggtcccttc
gattactttctggcctcgtcggctttgtgtgcggcttactttgtgaaattgtattgcaac
actcgcaacatcccgaccgaaaatatccgcctgtcgcaaaacaacattgttgatccggaa
aaccgctacaagcagattttcaagattcaggtcgagttgccgccggatatttctgctcac
gaccgccaggggattttgcgctccattgaacgttgtacagtgaaaaaagtggtgcagacc
ggtcccgagttcgtgatcgaagaggtcgagaacctggatgccgatgcgcagtcgttgctg
acattgaaaccggctcccgacgccagcacccatattctgggcaaggatctgccattggag
caaaccatcgccaatatgtccggcctgctggccggcttgggcatgaagattgaaatcgct
tcgtggcgcaatatcgttcccaatgtgtggtcgctgcatatccgcgatgcgcattcgccg
atgtgttttacaaatggcaagggcgcgaccaaggaaagcgcgctggcgtcggcactggga
gagtttatcgagcgcctgaattgcaaccatttctatggcgggacgttctggggcgaagac
atcggcaatgcgccgtttgtccattacccgaacgagcgctggttcaagccgggccgtaaa
gatgcgctgccggctgacattctcgatgaatactgccggcccatttacgaccccgacggc
gagctgcgcgcctcgcacctcatcgacaccaactcgggaaatgtgaaacgcggtatctgc
tcgctgccgtttgtgcggcagtcggacggtgaagtggtgtatttcccgtccaacctggtc
gaaaacctttacggcagcaatggcatgagtgccggtaatacgctggccgaagcgcaagtg
caatgcttgtccgagatttttgaacgggcggtaaagcgcgaaatcctagaaggcgaactg
gcactgcctgatgtgccgcaggacgtgctggcgaaataccctggcatcctggccggcatt
caagggttggaagagcagggctttccggtgctggtgaaggatgcatcgctgggtggaaag
tacccggtgatgtgcgtcaccttgatgaacccgcgtactggcggtgtctttgcttcgttc
ggcgcgcatccgagcttcgaagtggcgctggagcgcagcctgactgaactgctgcagggc
cgcagttttgaaggcttgaacgatctgcctcagcccacctttgtcagtgaagctgtgact
gagccaaacaactttgttgaacacttcattgactccagcggcgtggtgtcgtggcgcttt
ttcagcgccaaggcgaatttcgaatttgtcgagtgggatttttccggccagggcgagaag
tccaacgccgaggaagccgcgaccttgttcggcattctgaaagacatgggcaaagaagcg
tacatggcggtgtatgaccagctcggcgccgttgcttgccggattctggtgcccggctat
tccgaaatttatcccatcgaagatctggtctgggataacaccaacaaggcgctgttgttc
cgcgaagatatcctgaacttgcaccgcctggacgatgcaagtctggaagcgttgctcgag
cggttggataacaacgagctcgatgaatactccgacatcgccacgttgatcggcatcgaa
tttgacgagaatacagtctggggacagctgacggtcctcgaattgaagctgctcattcat
ctcgccttgcagcaactggaagaggcgcacgagctggtaggcggtttcttgcagtacaac
gacaacacggtcgagcgccggttgttttatcaagccttggacgtggtgctggaggtgctg
ctcgacgacgagcttgaactggacgattacgtggtcaatttccgccggatgtatggcaat
ccgcggatggatgcggtgctgggctcggtggacggcagcgtgcgcttctttggcttgacg
ccaaccagcatgaaactggaggggctcgaccggcaccaccgcctgatcgacagctacaag
aaagtgcatgcggcacgcggcaatgtagcggccacagtcggctag
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