Noviherbaspirillum sp. UKPF54: FAY22_04415
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Entry
FAY22_04415 CDS
T06116
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok00260
Glycine, serine and threonine metabolism
nok00460
Cyanoamino acid metabolism
nok00630
Glyoxylate and dicarboxylate metabolism
nok00670
One carbon pool by folate
nok00680
Methane metabolism
nok01100
Metabolic pathways
nok01110
Biosynthesis of secondary metabolites
nok01120
Microbial metabolism in diverse environments
nok01200
Carbon metabolism
nok01230
Biosynthesis of amino acids
nok01240
Biosynthesis of cofactors
nok04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FAY22_04415
09102 Energy metabolism
00680 Methane metabolism
FAY22_04415
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FAY22_04415
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FAY22_04415
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FAY22_04415
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FAY22_04415
Enzymes [BR:
nok01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FAY22_04415
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QDZ27261
UniProt:
A0A5B8N2U3
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All DBs
Position
927657..928904
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AA seq
415 aa
AA seq
DB search
MFAKDHTIAKVDPELWSAIQQENQRQQDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDVAETLAINRLKELFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMS
LAEGGHLTHGMALNMSGKWFNVVSYGLNEKEEIDYDAMEKLAREKKPKLIIAGASAYALR
IDFERFSKIAKEVGAYFMVDMAHYAGLIAAGVYPNPVPFADFVTSTTHKSLRGPRGGVIL
MKAEHEKAINSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFKAYQQQVVKNADALAKALI
ARGLRIVSGRTESHVMLVDLRAKKITGKEAEAILGSAHMTCNKNAIPNDPEKPFVTSGIR
LGSPAMTTRGFKEAEATKVGNLIADVLDNPHDAATIERVKAEVKKLTDAFPVYAR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcaaaagaccacaccatcgccaaagtcgatccggaactttggtccgccatccag
caggaaaaccagcgccagcaagaccatatcgagctgatcgcgtccgaaaactacacctcg
ccggccgtgatggaagcgcaaggctcgcagctgaccaacaagtacgcggaaggctatccg
ggcaagcgctattacggcggctgcgagttcgttgacgtggccgagactctggcgatcaac
cgcctgaaggaattgttcggcgcggaagccgccaatgtgcagccgaattccggttcgcag
gcgaaccaaggcgtgttcttcgcgatgctcaagccgggcgacaccatcatgggcatgtcg
ctggcggaaggcggccatctgacccacggcatggcactgaacatgtccggcaagtggttc
aacgtcgtttcctacggcttgaacgagaaggaagagatcgattacgacgcgatggaaaag
ctggcgcgcgaaaagaagcccaagctgatcattgccggtgcctccgcctatgcgttgcgc
atcgacttcgagcgtttctccaagatcgcgaaagaggtcggcgcctatttcatggtcgac
atggctcactatgccggcctgatcgccgccggtgtttatccgaatccggtgccgttcgcc
gacttcgtgacatccaccacccacaagtcgctacgcggcccgcgcggtggcgtgatcctg
atgaaggccgagcatgaaaaggcgatcaactccgctatcttccctggcatccagggcggt
ccgctgatgcatgtgatcgcaggcaaggcagttgcattcaaggaagcactgtcgccggaa
ttcaaggcataccagcagcaagtggtgaagaatgccgatgcactggccaaagcgctgatc
gcgcgcggcttgcgcatcgtatccggtcgcaccgaatcgcacgtgatgctggtcgatctg
cgcgccaagaaaatcaccggcaaggaagccgaagcgatcctcggttctgcccatatgacc
tgcaacaagaacgcgatcccgaacgacccggaaaagccgttcgtcacctccggtatccgc
ctcggcagcccggcgatgaccacccgcggcttcaaggaagcggaagcgaccaaggtcggc
aacctgatcgccgacgtgctggacaatccgcacgacgccgcgaccatcgagcgcgtgaag
gcggaagttaagaagctgaccgacgctttcccggtatacgcacgctaa
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