Noviherbaspirillum sp. UKPF54: FAY22_04505
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Entry
FAY22_04505 CDS
T06116
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok03030
DNA replication
nok03430
Mismatch repair
nok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAY22_04505
03430 Mismatch repair
FAY22_04505
03440 Homologous recombination
FAY22_04505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nok03032
]
FAY22_04505
03400 DNA repair and recombination proteins [BR:
nok03400
]
FAY22_04505
Enzymes [BR:
nok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAY22_04505
DNA replication proteins [BR:
nok03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAY22_04505
DNA repair and recombination proteins [BR:
nok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAY22_04505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_18
PIF1
AAA_30
AAA_5
AAA_2
TIP49
DUF3646
AAA_24
Glyco_tranf_2_5
AAA_19
TsaE
AAA_assoc_2
nSTAND3
AAA_7
Rad17
RsgA_GTPase
Mg_chelatase
Herpes_Helicase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QDZ27275
UniProt:
A0A5B8N2K0
LinkDB
All DBs
Position
943871..945778
Genome browser
AA seq
635 aa
AA seq
DB search
MSYQVLARKYRPKSFDTLVGQEHVVRALTHALEQKRLHHAYLFTGTRGVGKTTLSRILSK
SLNCETGITAKPCGTCEACTAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAPSNARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMPP
GHIVGHLENILGQESIEFDAPALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTLEAVQGM
LGALDQSYLIRVLDALAAKDGAGLLAVADEMATRSLSYNAALQDLGTLLHRIALAQTVPA
AVPDDVPEREDILRLAGCFDAEEVQLFYQIAVHGRNELSLAPDEYAGFSMTLLRMLAFRP
GIGAAEAKPAAAPASAAPAPAVAGAVARLSAAPQAATASAPVARPAGAMSPARAALEAAR
NGGKMPPAASIAPKPPSAPPPWEEEMPQARERAVPEAMEAEAQKKTEPPADAAALNGAGA
AVAVTERPVQAAPAPRQRAPDPTPVPALNWDGNWPALAASLPLRGVVQQLAQQSELLRCD
VQGEGAQFQLRIPLETLRSAGAVEKLTAALSEHFGKPVRVETEIGAVEHTANAQAVAERE
ARQRQAEENLQRDPFVQALVREFGATIVPGSIRPA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccaagtcctggcccgtaaatatcgccccaagagtttcgacacgcttgtcggg
caagagcacgtcgtgcgggcgctgacgcatgcgctggagcaaaagcggctgcatcatgcc
tacctgttcaccggcacgcgcggcgtcggcaagaccacgctgtcgcgcatcctgtcgaaa
tcgctcaactgtgaaacaggcattaccgccaagccatgcggcacttgcgaggcatgcacc
gcgatcgatgctggccgcttcgtcgactatattgaaatggatgccgcgtcgaaccgcggc
gtcgacgaaatggcgcaattgctggagcaggcgatttacgcgccgtccaatgcccgtttc
aaggtctacatgatcgacgaagttcacatgctgaccaaccatgcgttcaatgcgatgctc
aagacgcttgaagagccgcccgagcatgtgaaattcattctcgcgaccaccgacccgcaa
aagataccggtcaccgtgctgtcgcgctgcctgcagttcaacctgaagcagatgccgccc
ggccatatcgtcgggcatctggaaaacatcctcggccaggaaagcatcgaattcgatgcg
ccggcgctacgcctcctggcgcagggagcgcatggttccatgcgggacgcgctgtcgctg
accgaccaggccatcgcctatgccgctggcaaggtgacgctggaagcggtgcagggcatg
ctcggcgcgctcgaccagtcctacctgatccgcgtcctcgatgcgctggcagccaaggat
ggcgccggattgctggcagtggcagatgaaatggcaacgcgcagcctgtcgtacaacgcg
gcattgcaggacctcggcaccttgctgcaccggatcgcactggcgcaaaccgtgcctgca
gcggttcccgacgacgtgcccgagcgcgaggatatcctgcgcctggcggggtgtttcgat
gccgaggaagtgcagctgttttaccagatcgcggtgcacgggcgtaacgaactgagcctg
gcaccggatgaatatgccggattctcgatgaccttgctgcgcatgctggcctttaggccg
ggaatcggcgcggcggaagcgaagccggcggcggcgcctgcgtcggcagctcccgcgccg
gccgtcgccggcgcggttgccaggttaagcgccgcgccccaggcggcgacggcaagcgcg
ccggtggcgcggcccgccggtgcgatgagcccggcgcgcgccgcgctggaagccgcgcgc
aatggcggcaagatgccgcctgcggcgagcatcgcgcccaagccgccgagcgcgcctccg
ccgtgggaagaggaaatgccacaggcaagggaacgagccgtgcccgaagcgatggaggcg
gaggctcaaaaaaaaactgaaccgcccgccgacgcagccgcactgaacggtgcgggcgcg
gcggtcgcggtgacggaaaggccggtgcaagcggcgcccgcgccaaggcaaagggcgccc
gatccgaccccggttcccgccctgaactgggacggcaactggccggcgctggccgcgtcg
ctgcccttgcgcggcgtggtgcagcagctggcgcagcaaagcgaactgctgcgctgcgat
gtgcagggagagggcgcgcaattccagttgcggattccgctggaaacgctgcgttcggcc
ggtgccgtcgagaagctgacggcggcgttgagcgaacatttcggcaagccggtccgggtc
gagactgaaatcggcgctgtcgagcataccgccaatgcacaggcggtggccgagcgcgaa
gcgcggcagcgccaggcggaagaaaacctgcagcgcgacccgttcgtgcaggcattggtg
cgcgaattcggcgcaaccatcgtgccgggatcgatccggcccgcttaa
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