Noviherbaspirillum sp. UKPF54: FAY22_04640
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Entry
FAY22_04640 CDS
T06116
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok02020
Two-component system
nok02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FAY22_04640
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FAY22_04640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
nok02035
]
FAY22_04640
Bacterial motility proteins [BR:
nok02035
]
Flagellar system
Chemotaxis proteins
MCPs
FAY22_04640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
4HB_MCP_1
TarH
HAMP_2
Rep_fac-A_3
Mod_r
TetR_C_36
GIT1_C
COG6_N
Motif
Other DBs
NCBI-ProteinID:
QDZ27302
LinkDB
All DBs
Position
974119..975819
Genome browser
AA seq
566 aa
AA seq
DB search
MIFANLKIGARLGAGFSVVLLLLIATAALGLSRLAQVQQRMEEITGVNDEERDLVAEMRV
TVDDRMIALRNLALLKDAEDMKPEVERIKLQAERYARAEKKLTGMFSDRSGTTERQKALL
SAIAAENAAAAPVMAKAVDLGLANNAEEATRVLIKELRPVQRRWINALSELATAEEKLNL
QAVADSQAAYVNARTLMLGISALAVLAGAVIAWSITRSITRPINEAVKVAQTVAGGDLGN
RIEIRSTDETGQLLQALKEMNDSLVRIVGRVRSGTDTIATASAQIANGNLDLSSRTEEQA
SSLEETASSLEELTSTVKQNADNARQANHLARSASDVAREGGAVVSQVVDTMGAINESAK
KIVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKV
LIGDSVEKVDAGSKLVDHAGKTMQEIVGSIQRVTDIMQEIAAASQEQTSGIDQINQAIAQ
LDDVTQQNASLVEQAAAAAQSLQDQARDLTQVVSAFQLGDLAGSRKAEPAGAPALTRQPG
KIAHEPAGRMVRAGQLAGAGAGWEEF
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcgcaaacttgaaaattggtgcgcgtcttggcgccggtttttcagtggtgctg
cttttgttgattgccaccgccgcacttggcctgagccgtctggcacaggtgcagcaacgc
atggaagagatcaccggtgtcaacgatgaggagcgcgacttggtggccgagatgcgcgtt
acggtagatgacagaatgattgccttgcgcaacctcgcattgttgaaggatgcggaagac
atgaagcccgaggtggaacgcatcaagctgcaggcagagcggtatgcgcgggccgaaaaa
aagctcaccgggatgttttccgatcgttccggcaccacggaaaggcaaaaagcgctgttg
agcgcaatcgcggccgaaaacgccgccgccgctcccgtgatggccaaggcggtcgacctg
ggactggccaataacgcggaggaagcgacaagagtgctgatcaaggaattgcgtccggtg
cagaggcgctggattaatgcattgagcgagctggcgacggccgaggaaaagctcaacctg
caagccgtggccgactcgcaggccgcctatgtgaacgcccgcacgctgatgctggggata
agcgcgctggccgttctggccggcgcagtcattgcgtggagtatcaccaggagcatcacg
cgcccgatcaacgaggcggtaaaggtggcgcagacggtcgccggcggcgacctgggcaac
cgcattgagattcgctctaccgacgaaaccggccagctgcttcaggcactgaaagagatg
aatgacagcctggtgcgcatcgtgggacgtgtacgcagcggcaccgataccatcgcgacg
gcgtcggcgcaaatcgcaaacggaaacctggacctgtcgtcgcgcaccgaagagcaggca
agctcgctggaggaaacggcgtcgtccctggaggaattgacttccaccgtcaagcaaaac
gcagacaatgcgcggcaggctaaccatttggcgagatcggcctctgacgttgccagggag
gggggcgccgtggtgtcgcaagtggtcgatacgatgggcgcgatcaacgaatcggcaaag
aagatcgtcgacattattgccgtgatcgacggcatcgctttccagaccaatatcctggcc
ttgaatgccgcggtggaagccgcacgtgccggcgagcaggggcgcggcttcgccgtggtc
gcgtccgaggttcgctcgctggcccagcgttccgccagcgccgccaaggagatcaaggtc
ctgatcggtgactcggtggaaaaggtcgacgccggcagcaagctggtggaccatgccggc
aagaccatgcaggagattgtgggcagcatccagcgcgtcacggacatcatgcaagagatt
gccgcagccagccaggaacaaaccagcggcatcgatcaaatcaatcaggcaatcgcgcag
ctcgacgacgtgacgcagcagaatgcttcgctggtggagcaagccgccgctgccgcgcaa
agcctgcaggaccaggcgcgcgatctgacgcaggtggtcagcgcattccagttgggcgat
cttgcagggagccggaaagcagaacctgcaggcgcgcccgcgctaacgcggcaaccgggg
aaaatcgcgcacgaacccgcagggcgcatggtccgagccggccagcttgcaggcgcagga
gccggttgggaggagttttag
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