Noviherbaspirillum sp. UKPF54: FAY22_04935
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Entry
FAY22_04935 CDS
T06116
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FAY22_04935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nok03400
]
FAY22_04935
Enzymes [BR:
nok01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FAY22_04935
DNA repair and recombination proteins [BR:
nok03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FAY22_04935
Prokaryotic type
FAY22_04935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
POR
DUF6079_5th
Motif
Other DBs
NCBI-ProteinID:
QDZ27355
LinkDB
All DBs
Position
1040831..1041622
Genome browser
AA seq
263 aa
AA seq
DB search
MPTMIPQPIQEALKFAHPSWRSTLGRGLEAIAEADPSYLPALAEDSYLPTEGRMFAAFAQ
PLDKVRYVLVGEGPYPREQSATGVCFMDGAVESLWSEKGLSKQVNRATSLRNFMKMLLVA
DGLLAADNTSGDAIAQVSMKARTIGSPFVQTLTELQANLTRNGFLLLNAALVFRPHVPPA
KEARAWQPFLQVVLAALAEHAGRHGIAPPTLVLWGKIAEQLKGLPATEQFPKALSEHPYN
LTFIQNETMQQLFGPMHLLQGEA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgccgacaatgattccgcaaccgatacaagaggccctcaagttcgctcatccatcgtgg
cgttccacactggggcgcggcctggaggcaattgcggaagccgatccgtcttacctgcct
gcgctggccgaggatagttatctgcccaccgagggacgcatgttcgctgcgttcgcgcag
ccgctggacaaggtgcgctatgtgctcgtgggagaagggccctatccgcgcgagcagagc
gccaccggcgtgtgcttcatggacggtgcggtcgagtccctctggtccgagaaaggcttg
tcgaagcaggtcaatcgcgccacctccctgcgcaatttcatgaagatgctgctggtggcg
gacgggttgctcgcggcagacaatacgtcgggcgacgccatcgcccaggtttcgatgaag
gcgcgtacgatcggatctcctttcgttcaaacgctgaccgagctgcaggcaaacctcacg
cgcaatggttttttgctgctgaacgccgcgctagtgtttcgcccccacgtgccgccggcg
aaagaggcgcgcgcatggcaaccgttcctgcaagtcgtgctggcggcgctggctgagcat
gctggtaggcatggaatcgcgccaccgacgctggtgctgtgggggaagatcgccgagcag
ctgaagggattgccggcgaccgagcaatttccgaaagcgctgtccgagcatccttacaac
ctgacttttatacagaacgagacaatgcagcagctgttcggcccgatgcatttgctgcaa
ggagaggcttaa
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