Noviherbaspirillum sp. UKPF54: FAY22_05025
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Entry
FAY22_05025 CDS
T06116
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok00500
Starch and sucrose metabolism
nok01100
Metabolic pathways
nok01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
FAY22_05025 (glgX)
Enzymes [BR:
nok01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
FAY22_05025 (glgX)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_77
Motif
Other DBs
NCBI-ProteinID:
QDZ27373
UniProt:
A0A5B8N3J9
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Position
1058349..1060484
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AA seq
711 aa
AA seq
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MFFEIPGRLSPGRPYPLGATFDGQGVNFAVFSANAERVDLCIFDAAGRHEVARLPLPDCT
DEVWNGYLPEAGPGLLYGFRAYGPYQPEQGHRFNPHKLLLDPYARLLSGPLRWSDALFGY
RLGSARADLSFDRRDSAPAMPKSVVAEDVFNWGEDRRPVVPWSKTVIYEVHVRGISILRE
DLRADLRGTFAALANPRFIDHLHRLGVTTIELMPVNAYMQDRFLLEKGLRNYWGYSPLSF
FAPEPAYLSQGGLNDMRLAVRRLHAAGIEVILDVVYNHTSSGNELGPTICFRGLDNASYF
RLVPGNERYYINETGCGNTLNISHPRVLQLVMDSLRYWAQAFHIDGFRFDLGATLGREGT
GFDPGSGFFDAILQDPLLSRLKLISEPWDIGPGGYQLGNHPPRFAEWNDKFRDGVRRFWR
GDAGLRADFAARLSGSADLFSRRHRKPWASINYVASHDGFTLQDVVSYSEKHNEANGENN
NDGHSENYSANWGAEGPSDDAAILARRERVRRAMLATVMLAQGTPMLLAGDEFGRTQRGN
NNAYCQDNDISWVDWALAQTPAGGSLVAYVARLGIIRHSFCALQSDRFHYGAELAPGVQD
IAWFDERGEVVAPEAWQNPEARALAVQRASIEEDGRTGIVLLFINAWHEPITFSFPAPGA
LPRRWYLLADSAGEESRVREVTQGSVDVQGFSVMVFANRVPRELRLADMEE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgaaatcccgggccgcctgagccctgggcgtccctatccgctgggcgcgacc
tttgacgggcagggcgtcaatttcgccgtgttttccgccaatgccgagcgtgtcgacttg
tgcatcttcgacgccgccggacggcatgaagtcgcgcggctccccttgcccgactgtacg
gacgaagtctggaacggctacctgccggaagccggcccggggctgctgtacgggttccgc
gcctacggcccgtaccagccggagcaggggcatcgcttcaacccccacaagctcctgctc
gatccgtacgcgcgcctgttgtcgggaccgctgcgctggtcggacgcgttgttcgggtac
cggctcggttcggcgcgcgccgacctgagtttcgaccggcgcgatagcgcgccggcgatg
cccaagtcggtcgtggcggaggacgtcttcaactggggcgaagaccgccgccccgtcgtg
ccgtggtccaagaccgtcatctatgaagtacacgtgcgcggcatttcgatcctgcgcgag
gacctgcgcgccgacttgcgcggcaccttcgcagcgctggccaatccgcgcttcatcgat
cacctgcaccggctgggcgtgaccacgatcgagctcatgccggtcaatgcctacatgcag
gatcgatttcttctggaaaagggtttgcgcaattactgggggtacagcccgttatccttc
ttcgcgccggaacccgcctacctgtcgcagggcgggctgaacgacatgcggctggcggtg
cggcggctgcatgcggccggcatcgaagtcattctcgacgtggtctacaaccataccagc
agcggcaacgaactgggaccgaccatctgttttcgcggcctggacaatgccagctacttc
cgcctggtgccgggcaacgagcgttattacatcaatgaaaccggatgcggcaataccctc
aacatatcgcatccgcgcgtgctgcagctggtcatggattcgctgcgctactgggcgcag
gccttccatatcgacggcttccgcttcgacctcggcgccacgctggggcgcgaaggcacc
ggcttcgacccgggctcgggctttttcgatgcgattctgcaagacccgctgctgtcgcgc
ctgaaactgatttcggagccgtgggatatcggtcccggcggctaccagctcggcaaccat
ccgccccggttcgcggagtggaacgacaagttccgcgacggcgtgcgacgcttctggcgc
ggcgacgccgggctgcgcgcggatttcgcggcgcgcctttccggctcggccgacctgttc
agccggcgccaccgcaagccgtgggcctcgatcaactacgtcgcctcgcacgatggcttc
accttgcaggatgtcgttagttattccgaaaagcacaatgaagccaacggggaaaacaac
aacgacggccattccgagaattacagcgcgaactggggcgccgaaggcccgagcgacgac
gccgccatcctggcgcggcgcgagcgcgtgcggcgcgccatgctcgccacggtgatgctg
gcgcagggcacgccgatgctgctggccggggacgagttcggccgcacgcagcgcggcaac
aacaatgcgtattgccaggacaacgatatttcatgggtcgactgggcgctggcgcaaacg
ccggccggcggttcgctggtcgcctacgtcgcgcggctgggaatcatccggcatagcttt
tgcgctttgcagtcagatcggtttcattacggcgcggagctggcgcccggcgtgcaggac
attgcctggttcgacgagcgcggcgaggtagtagcgccggaggcatggcaaaacccggag
gcgcgggcgctggcggtgcagcgcgccagcatcgaggaggatgggcgcaccggcatcgtc
ctgctgttcatcaacgcctggcatgagccgatcacgttcagcttcccggcgcccggcgct
cttcctcggcgctggtatctgctcgccgacagcgccggggaagagagccgggtgcgggaa
gtgacgcaaggctcggtggatgtgcagggcttcagcgtgatggtgttcgcgaatcgcgtg
cccagggaattgcgcctggcggacatggaggagtag
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