Noviherbaspirillum sp. UKPF54: FAY22_06220
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Entry
FAY22_06220 CDS
T06116
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok00300
Lysine biosynthesis
nok01100
Metabolic pathways
nok01120
Microbial metabolism in diverse environments
nok01230
Biosynthesis of amino acids
Module
nok_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FAY22_06220 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nok01002
]
FAY22_06220 (dapE)
Enzymes [BR:
nok01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
FAY22_06220 (dapE)
Peptidases and inhibitors [BR:
nok01002
]
Metallo peptidases
Family M20
FAY22_06220 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QDZ27584
UniProt:
A0A5B8N522
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All DBs
Position
complement(1323503..1324630)
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AA seq
375 aa
AA seq
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MSKTLALTEELIALSSVTPDDKGCQRRLMELLSPLGFQCESVESGNVTNLWARRGTTQPL
VVFAGHTDVVPTGPLDQWHSDPFVPTRRDGKLYGRGAADMKTSIAAMVVAVEEFVGNHPD
HKGSIGFLITSDEEGPAIDGTVIVCDMLKARGEQLDYCIVGEPTSSDQLGDVIKNGRRGS
LSGRLTIKGVQGHIAYPHLAKNPIHLAAPALAELAAEHWDNGNEYYSPTSWQMSNIHAGT
GATNVIPGEVVVDFNFRFSTASAVEDLQQRVHAILDKHDFDYGIEWTVGGRPFLTPRGAL
CDAMTEAIKSETGIDAELSTTGGTSDGRFIAQICPQVIEFGPPNGSIHKIDEHIELRFID
PLKNIYRRALENLLR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacgcttgccctcacggaagaactgatcgccctctcctccgtgacgccggac
gacaagggctgccagcgccggctgatggaactgctgtctccgctcggatttcaatgcgag
agcgtggagtccggcaatgtgacgaacctctgggcgcgccggggcaccacgcagccgctg
gtcgtctttgccgggcataccgatgtcgtgccgaccggaccgctcgaccagtggcattcc
gacccgttcgtgcccacccggcgcgacggcaagctgtacggccgcggcgcggccgacatg
aaaacgtcgattgccgcaatggtggtcgcagtcgaagaattcgtcggcaaccatccggac
cacaagggctcgatcggttttctgatcacgagcgacgaggaaggcccggccatcgatggc
accgtgatcgtgtgcgacatgctcaaggcacgcggcgagcagctcgactactgcatcgtc
ggcgagccgacctcttccgaccagttgggcgacgtgatcaagaacggccggcgcggttcg
ctgtccgggaggttgaccatcaagggcgtgcagggccacatcgcctatccgcacctggcg
aagaacccgatccacctggccgcccccgcgctggcggagctggcggcggagcactgggac
aacggcaacgaatactactcgccaacctcctggcagatgtccaatatccatgcaggcacc
ggcgcgaccaacgtgattccgggcgaagtcgtggtcgatttcaatttccgtttttccacc
gcgagcgcggtcgaagacttgcaacagcgcgtgcacgcgatcctggacaagcatgatttc
gactacggcatcgagtggaccgtcggcggccgccctttcctcacgccgcgcggggcgctg
tgcgacgcgatgaccgaggcgatcaagtcggaaaccgggatcgatgccgagctgtcgacc
accggcggcacctcggacgggcgcttcatcgcccagatctgcccgcaggtgatcgagttc
ggcccgcccaacggcagcatccacaagatcgacgagcatatcgaactgcgcttcatcgat
ccgctcaagaacatctaccggcgcgccctggaaaacctgctgcgttaa
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