KEGG   Noviherbaspirillum sp. UKPF54: FAY22_06650
Entry
FAY22_06650       CDS       T06116                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
nok  Noviherbaspirillum sp. UKPF54
Brite
KEGG Orthology (KO) [BR:nok00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nok02044]
    FAY22_06650 (tssC)
Secretion system [BR:nok02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FAY22_06650 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 DUF1877
Other DBs
NCBI-ProteinID: QDZ27664
LinkDB
Position
1415847..1417331
AA seq 494 aa
MAAQAQAVQAYAEQASESLLDQVITQSRVARSDSERARARDLISELVAQVMDGTVVVSNN
LAATLDARIAELDELISEQLSEILHAPEFQQLESTWRGLHYLCKHTSTGDTLKIKVLNAS
KKDLVRDFSNAIDFDQSALFKKVYEEEFGTFGGAPFGALLGDYEITRQPEDMYFIEQMSH
VAAAAHAPFISSASPELLGLESFADLGKPRDLAKVFDTLEYVKWKSFRESEDARYVGLVV
PRFLGRMPYHPKEGTVVDGFNFAEDVDGADHHKYLWVNAAYAFAARLTGAFEHFGWCAAI
RGVEGGGLVEDLPTHTFKTDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCKNTDYAA
FFGAQSAQRARKYNTDAANANAVLSAQLQYVFASCRIAHYLKSMMRDKIGSFAAAANVEQ
FLNNWLAQYVVMDDSASQEVKAQYPLREAAVQVSEVPGRPGVYRAVTFLRPHFQLDELSV
SLRLVAELPQSAKA
NT seq 1485 nt   +upstreamnt  +downstreamnt
atggcagcccaagctcaagccgttcaggcatatgcggagcaggcttcggaaagcctgctc
gaccaggtaattacccagagcagggtggcacgttcggacagcgaacgcgctcgcgcaaga
gacttgatcagcgaattggtggcgcaggtcatggacggcaccgtggtcgtgtcgaacaac
ctagcggcgactttggatgcgcgtatcgccgaactggacgagctcatctcggagcagctc
agcgaaatcctgcatgcgccggaattccagcaactggaaagcacctggcgcggcctgcat
tatctgtgcaagcacacctcgaccggggacacgctgaaaatcaaggtcctcaacgcttca
aagaaagacctggtgcgcgacttcagcaacgccatcgacttcgatcagagcgcgctgttc
aagaaggtctacgaggaagagttcggaacattcggcggagcgcctttcggcgcgctgctc
ggcgactacgaaatcacgcgccagccggaagacatgtatttcatcgagcagatgtcgcat
gttgcagccgctgcccacgcgccattcatttcctccgcttcgccggaactgctggggctg
gagtcgttcgccgacctgggcaagccgcgcgacctggcaaaggtgttcgacaccctcgaa
tacgtcaaatggaagtcctttcgcgagtcggaggacgcgcgctatgtcggccttgtcgtg
ccgcgcttcctggggcggatgccataccacccgaaggagggtacggtggtcgacggcttc
aattttgccgaagacgtggatggcgccgatcaccataaatacctgtgggtgaatgccgcg
tatgcctttgccgcgcgcctgaccggagcgttcgagcatttcggctggtgcgcggcgatc
cgcggagtggaaggcggcggtctggtggaggacttgccgacccacacgttcaagaccgac
gacggcgaaatcgcgctgaagtgcccgactgaaatcgcgatcactgatcgccgcgaaaag
gagttgagcgacctcggcttcatccctctggtccactgcaagaacaccgattacgcggca
tttttcggagcgcagtctgcgcagcgcgcccggaaatacaacaccgatgccgccaatgcc
aatgccgtgctgtcggcacaactgcaatacgtcttcgcgtcctgccgcatcgcgcattac
ctgaagtcgatgatgcgcgacaagatcggcagcttcgccgccgcagccaacgtcgagcag
tttttgaacaactggctggcgcagtatgtcgtgatggatgactctgcatcccaggaagtc
aaggcgcaatacccgttgcgcgaagcggcggtgcaggtatcggaagtgccgggccgccct
ggcgtttatcgcgccgtcactttcctgcggcctcatttccagcttgacgaactcagcgtg
tcgctgcgcctggtggccgaattgccgcagtcggcaaaggcgtag

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