Noviherbaspirillum sp. UKPF54: FAY22_11020
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Entry
FAY22_11020 CDS
T06116
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
nok
Noviherbaspirillum sp. UKPF54
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nok02000
]
FAY22_11020
Transporters [BR:
nok02000
]
Other transporters
Pores ion channels [TC:
1
]
FAY22_11020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QDZ30570
LinkDB
All DBs
Position
complement(2379931..2381793)
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AA seq
620 aa
AA seq
DB search
MTFFTSRPVNAAWTPIALVSALTVAPVYAQTDSEKTLAPVVVTASRTEQLQTEALPHTTV
LTAQEIRNSQAVDLPALLKREAGVQITQNGGPGQASGMFVRGAETRQTLVLIDGVPLTKQ
DATGTVSIEHLMLDQIDRIEIVRGNVSSIYGSGAIGGVIQVFTKRGEGAPSLNVNAEAGS
RGTTRVSAGVNGSSGATRYSLAASDFRTDGFSALNHDQIASANPDKDGYRNTSVSGMVSQ
EWSKGQELGLRFSSAEGKFDFDSSFGAPTDVHFGKTNVDTFTLFTQNRFASNWSSRVMYS
ESRDKNANHYDTAFGVSDDRFVSKTRSLQWNNEITLSPTWTATAGAERQWQALDSDDGFG
TVFATNRNANSIFAGLQGRLDAHQWQVNVRHDQTDKVDSATTGYLGYGFNFTKAFKATAS
LSSGFSVPPLGYLYSPFFGNPNLKPEHSRSAELGLQYATSAALLRATLFKTRVTDQLQYD
LVANRFENVARASNEGLELSASGTCLDTDLRASLTLQDPRDDTTGQRSRRRARTLASLSA
NKTFGHWQVGGDLGYTGVRQDGTRELGAYWIGNLTSRYEIKKGLSLFGRIENLFDRDYQT
AYGYNQPPRGVFVGVNWQPL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgacttttttcacctcacgtccagtcaacgcggcatggacgccgatcgcgctcgtttcc
gcattgaccgtcgcgcccgtttacgctcagacagacagcgaaaagacgctggctccggtc
gtagtgactgcgtcgcgcaccgagcagctgcagaccgaagcgttgccgcatacgacggtg
ctgactgcacaggaaatccgcaattcgcaggcagttgacctgcctgcgcttctcaagcgc
gaagcgggcgttcaaataacgcaaaacggcggccccggccaagccagcggcatgttcgtg
cgcggcgctgaaactcggcagacgttggtgctgattgacggtgtgccgctgaccaagcag
gacgctaccggcacggtcagcatcgagcacctgatgctcgaccagattgaccggatcgag
atcgtgcgcggtaacgtctcgagcatttacggctccggcgccatcggcggggtcattcaa
gtcttcactaaacgtggagaaggagcgccgagcctcaacgtcaacgcggaagcgggatcg
cgcggcacgacgcgggtatcggcaggtgtcaatggctcatcaggcgctacgcgttattcg
cttgcagcttccgacttccggactgacggattctcggcgctgaatcatgaccagattgcg
agcgccaaccccgacaaagacggctaccggaataccagcgtcagcggaatggtttcccag
gagtggtcgaaggggcaggagctgggcctgcgcttttcaagcgcggagggtaaattcgat
ttcgacagcagcttcggcgccccgaccgacgtccatttcggcaagaccaatgtcgacact
ttcacactgtttacccaaaaccgatttgcctcgaactggtcttcccgcgtgatgtactcc
gagtcccgcgacaagaacgcaaatcactacgatacggcattcggcgtttcggatgaccgc
ttcgtcagcaagacgcgcagcctgcaatggaataacgaaatcaccttgtcgcccacttgg
accgcaacggcgggagccgagcggcagtggcaggcgctggacagcgacgacggattcggt
accgtgtttgcaacgaaccgcaatgccaacagtatcttcgccgggttgcaaggcagactg
gatgcgcatcagtggcaagtgaacgtgcggcacgatcagaccgataaggtcgattcggcg
accacgggatatctcggttacggattcaatttcacgaaggcgttcaaggcgaccgctagc
ttgtcttccggattcagcgtgcctccgctcggttacctgtactcgccgttcttcggcaat
ccgaacctgaagccggagcattcccgctcggcagaactcggtctgcagtacgcaacttcg
gctgcattgctgcgcgcgaccctgtttaaaacgcgtgttaccgatcagctgcaatacgac
ctggtggcgaaccgcttcgaaaatgttgcgcgtgccagcaacgagggccttgagctgagc
gccagcggtacctgccttgataccgatttgcgcgcgagcctgacccttcaggatccgcgc
gacgatacgaccggccagcgttcgcgtcgacgcgcacggacgctcgcgtcgctctccgcg
aacaagacttttggtcattggcaggtgggcggagatctgggctataccggggttcgccag
gatggaacacgcgagctgggcgcgtattggatcggcaacctgacttcaaggtatgagatc
aagaaagggctttcgctgttcgggcgaatcgaaaatctgttcgatcgtgattaccagacc
gcttacggctacaaccagcctccgcgcggcgtattcgtcggcgtaaactggcaacctttg
taa
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