Noviherbaspirillum sp. UKPF54: FAY22_12340
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Entry
FAY22_12340 CDS
T06116
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FAY22_12340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nok02000
]
FAY22_12340
Transporters [BR:
nok02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
FAY22_12340
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Paralog
GFIT
Motif
Pfam:
BPD_transp_1
DnaG_DnaB_bind
DUF4504
DUF8413
Motif
Other DBs
NCBI-ProteinID:
QDZ28669
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All DBs
Position
complement(2689901..2691184)
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AA seq
427 aa
AA seq
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MTTSAIAPAIDLPIAEPSTAQLKRELHRAQLRKRLSAIALIAPLMIFLLVVFVAPIAILL
KRAVENPEVADTLPNTVVALKGWKRTGTPPDAAYAALAADLAVAREHSTAGNLARRVNSE
LPGARSVIMKTARAMPLQGADGKPMTPQETRQALIDIDEQWGKPEYWQVIAKNGSRYSPY
YLLASLDLRQDGMGNIVHMDEDQSAYQQIFMRTFVISLGVTLFCLLLGYPLAYWLSTMPE
RRANLFMILVLIPFWTSILVRVAAWMVLLQSEGLVNKTLMALHLTNSPLELLFNRTGVYI
SMTHILLPFMILPMYSVMKSIPPSYMRAAVSLGSHPFAAFWRVYVPQTYPGIGAGALLVF
ILALGYYITPALLGGTNEQMVSYYVAYFINVTINWGMACALGALLFAATLVLYGVYRRFA
KMDVSMG
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgactacttccgcaatcgctccggccatcgatctgcccatcgccgagccatctaccgcg
cagctgaagcgcgaactgcatcgggctcaattgcgcaagcgcctgtcagccattgcgctg
atcgcgccgctgatgattttcctgctggttgtattcgtcgcgccgattgcgatcctgctc
aagcgtgccgtcgaaaacccggaagtcgcagacaccctgcccaacaccgtggtggcgctg
aagggctggaagcgcaccggcacgccgccggacgccgcgtatgccgcgctggctgccgat
cttgccgtcgcacgcgagcacagcaccgccggcaatctggcgcgccgcgtcaacagcgaa
ctgcccggcgcccgctccgtcatcatgaaaaccgcgcgcgccatgccgctgcaaggcgcc
gacggaaaaccgatgacgccgcaggaaaccaggcaggcgctgatcgacatcgatgagcaa
tggggcaaaccggaatactggcaggtgattgccaagaacggctcgcgctattcgccatac
tatctgctcgcatcgctcgacctgcgccaggacggcatgggcaacatcgtgcacatggac
gaggatcagtctgcctaccagcagattttcatgcgcaccttcgtcatcagccttggcgtg
accctgttctgcctgctgctcgggtatccgcttgcatactggctgtcgaccatgccggaa
cggcgcgccaacctgttcatgatcctggtgctgatcccgttctggacctcgatcctggtg
cgcgtcgccgcctggatggtgttgctgcagtcggaaggattggtcaacaagaccctgatg
gcgctgcacctgaccaactcgccgctggagttgctgttcaatcgcactggcgtgtatatc
tcgatgacgcacatcctgctgccgttcatgatcctgccgatgtacagcgtgatgaaatcg
atcccgccgtcttacatgcgcgccgcggtctcgctcggcagccatccgttcgccgcgttc
tggcgcgtgtacgtgccgcagacctatccgggcatcggcgccggcgcgctgctggtgttc
atcctcgcgcttggctactacatcacgccggcgctgttgggcggtaccaacgaacagatg
gtcagctactacgtcgcctacttcatcaatgtgacgatcaactggggcatggcgtgcgcg
ctgggggctctgctgttcgcggcaacgctggtgctgtacggcgtgtaccggcgcttcgcc
aagatggacgtgagcatgggatga
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