Noviherbaspirillum sp. UKPF54: FAY22_12470
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Entry
FAY22_12470 CDS
T06116
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAY22_12470 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nok03019
]
FAY22_12470 (groL)
03110 Chaperones and folding catalysts [BR:
nok03110
]
FAY22_12470 (groL)
03029 Mitochondrial biogenesis [BR:
nok03029
]
FAY22_12470 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nok04147
]
FAY22_12470 (groL)
Enzymes [BR:
nok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FAY22_12470 (groL)
Messenger RNA biogenesis [BR:
nok03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FAY22_12470 (groL)
Chaperones and folding catalysts [BR:
nok03110
]
Heat shock proteins
HSP60 / Chaperonin
FAY22_12470 (groL)
Mitochondrial biogenesis [BR:
nok03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FAY22_12470 (groL)
Exosome [BR:
nok04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FAY22_12470 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FAY22_12470 (groL)
Exosomal proteins of breast cancer cells
FAY22_12470 (groL)
Exosomal proteins of colorectal cancer cells
FAY22_12470 (groL)
Exosomal proteins of bladder cancer cells
FAY22_12470 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QDZ28692
LinkDB
All DBs
Position
2718633..2720282
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKEVVFGDAARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDKLMNMGAQMVKEVASKTSDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGI
DKAVHTTVDELKKIAKPCTTSKEIAQVGAISANSDASIGERIAEAMEKVGKEGVITVEDG
KSLNDELEIVEGMQFDRGYLSPYFINNPDKQVAVLDNPFVLLFDKKISNIRDLLPVLEQV
AKSSRPLLIIAEDIEGEALATLVVNNIRGILKTCAVKAPGFGDRRKAMLEDIAILTGGQV
IAEEVGLTLEKATLNDLGQAKRVEIGKENTTIIDGAGQAAAIEARVKQIRVQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RARANVQNLKGDNPDQDAGIKIVLRAMEEPLRMIVTNAGEEASVVVNKVIEGKGNFGYNA
ANGTYGDMVEMGVLDPAKVTRSALQNAASIAGLMLTTDCTVAELVEDKPAAPMGGMGGMG
GMGGMEGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtcgtattcggcgatgccgcccgtgccaagatggttgaaggcgtc
aacattctcgccaacgccgttaaagtcaccctcggcccgaaaggccgcaacgtcgtgctg
gagcgttccttcggcgccccgaccgtcaccaaggacggcgtttcggtcgctaaagagatc
gaactgaaagacaagctgatgaacatgggcgcgcagatggtcaaggaagttgcttccaag
acctccgacaacgccggtgacggtaccaccaccgcaaccgtgctggcccaggcaatcgtg
cgcgaaggcatgaagtacgttgccgccggcatgaacccgatggacctgaagcgcggcatc
gacaaggcagtgcacaccactgtcgacgaactgaagaagatcgccaagccctgcaccacc
tccaaggaaatcgcccaagtcggcgccatctccgcgaactccgacgcttccatcggcgag
cgcatcgctgaagcaatggaaaaggtcggcaaggaaggcgtgatcactgtcgaagacggc
aagtccctgaacgacgaactcgaaatcgtcgaaggcatgcagttcgaccgcggctacctg
tccccgtacttcatcaacaacccggacaagcaagttgccgttctggacaacccgttcgtc
ctgctgttcgacaagaagatctccaacatccgcgacctgctgccggtgctggaacaagtc
gccaaatcgagccgtccgctgctgatcatcgctgaagacatcgaaggcgaagcgctggcc
accctggtggtgaacaacatccgcggcatcctgaagacctgcgcagtgaaggctccgggc
ttcggcgaccgtcgcaaggccatgctggaagacatcgctatcctgaccggcggccaagtg
atcgctgaagaagtcggcctgaccctggaaaaggcaaccctgaacgacctgggccaagcc
aagcgcgtcgaaatcggcaaggaaaacaccaccatcatcgacggcgctggtcaagctgct
gcgatcgaagcccgcgtcaagcaaatccgcgtgcagatcgaagaagcgacttccgactat
gaccgcgaaaagctgcaagagcgcgttgccaagctggcaggcggcgttgcagtgatcaag
gttggcgctgcgaccgaagtcgaaatgaaagagaagaaggcacgtgtcgaagacgcgctg
cacgcaacccgtgccgccgttgaagaaggcatcgttcctggcggcggcgtggccctgctg
cgcgctcgcgccaacgtgcaaaacctgaagggcgacaaccccgatcaggacgcaggcatc
aagatcgtcctgcgcgcgatggaagagccgctgcgcatgatcgtcaccaacgccggcgaa
gaagcttccgtggtcgtcaacaaggttatcgaaggcaagggtaacttcggttacaacgct
gccaacggtacctacggcgacatggtcgaaatgggcgtgctggacccggccaaggtcacc
cgctcggctctgcagaacgcagcgtcgatcgccggcctgatgctgaccaccgactgcacc
gttgccgagctggttgaagacaagccggctgctccgatgggcggcatgggtggcatgggc
ggcatgggcggcatggaaggcatgatgtaa
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