Noviherbaspirillum sp. UKPF54: FAY22_13225
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Entry
FAY22_13225 CDS
T06116
Name
(GenBank) PAS domain S-box protein
KO
K03776
aerotaxis receptor
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok02020
Two-component system
nok02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FAY22_13225
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FAY22_13225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
nok02035
]
FAY22_13225
Bacterial motility proteins [BR:
nok02035
]
Flagellar system
Chemotaxis proteins
MCPs
FAY22_13225
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MCPsignal
PAS_3
PAS_9
PAS
HAMP
PAS_4
ATG17_like
HmpF
HAMP_2
PTS_EIIC
SKA1
PAS_8
ATG14
Motif
Other DBs
NCBI-ProteinID:
QDZ28829
LinkDB
All DBs
Position
2863682..2865265
Genome browser
AA seq
527 aa
AA seq
DB search
MRKNLPVTGAEYILKDSETIVSKTDLKGKITYVNRDFIDISGFSEEELLGAPQNIVRHPD
MPPQAFEDFWRTLKSGKAWTGLVKNRCKNGDHYWVEANAAPIIENGKVTGYTSIRIKPSR
EQVEAAEAAYRTINAGDKTLEIREGMAVRRSPLDRLNIAHKLSLKRKMGMAFGILALLFA
ANGAAAMGLANGTTALATAGAGLLLAILFNTMLHSNIVAPLERARRDIERMSMGDLSCKI
ESAGDNEISRLLQSIRILQTNVKLLVGQIKEATDLVNRGSREIATGNADLSARTESQASS
LEETASSMEELTSTIQQNAQSAQEANKLAESASGIAARGGAAVGQVIETMGAIKDSSRKI
ADIISVIDGIAFQTNILALNAAVEAARAGEEGRGFAVVASEVRTLAQRSAVAAGEIKTLI
VDSVEQVEAGSDLVDRAGNTMEEVVASITQLAEIMNHITLASREQRAGIEQMNQAITEMD
AITQQNAALVEQSAAAAESLQEQAEKQWHLVGAFKLAAAERSARLLH
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagaacctgccggttaccggcgccgaatacatattgaaagactcggaaacgatc
gtttcgaagaccgacctgaaaggcaagatcacctacgtcaaccgcgacttcatcgacatc
agcggcttctcggaagaggagctgctgggggcaccgcaaaacatcgtgcgccatcccgac
atgccgccgcaggcattcgaggacttctggcgcacgctcaagagcggcaaggcatggacc
ggcctggtgaaaaaccgctgcaagaacggcgatcactactgggtcgaagcgaacgccgca
cctatcatcgaaaacggcaaggtgaccggttacacgtcgatccgcatcaagccctcgcgc
gaacaggtggaggcggccgaagccgcttaccgcaccatcaatgccggcgacaagacgctg
gaaatccgcgagggcatggcggtgcgccgttcgcccctggacagactgaacatcgcgcac
aagctctccctcaaacgcaagatgggcatggcgttcggcatcctggcgctgctgtttgcc
gccaacggcgctgccgccatgggactggccaacggtacgacggcgctggcgacagcggga
gccggcctgctgctggcgatcctgttcaacaccatgcttcacagcaacatcgtcgctccg
ctggagcgcgcccggcgcgacatcgaacgcatgagtatgggcgacctgtcgtgcaagatc
gaatccgcgggagacaacgagatttcccggctcctccagtcgatccgcatcctgcaaacc
aacgtgaaacttctggtcggccagatcaaggaagcgaccgacctagtcaaccgcggatcg
cgcgaaatcgcgaccggcaacgccgacctgtcggcgcgcaccgaatcgcaggccagttcg
ctggaagagacagcctcgtccatggaggaattgaccagcacgatccagcagaatgcacaa
agcgcgcaggaggcgaacaagctggccgagtcggcctccggcatcgccgccaggggaggc
gctgcggtcgggcaggtgatcgaaacgatgggcgcgatcaaggacagttcgcgcaagatc
gccgatatcatttcggtcatcgacggaatcgccttccagaccaatatcctggcgctcaat
gccgcggtggaagccgcgcgcgcaggcgaagaggggcgcggtttcgcggtagtcgcgtcg
gaagtgcgcacgctggcgcaacgatcggccgtggccgccggggaaatcaagaccctgatc
gtcgactcggtcgaacaggtggaagccggcagcgaccttgtcgatcgggccggcaacacc
atggaagaggtcgtcgcatcgatcacgcagctggccgagatcatgaatcacatcacgttg
gccagccgcgaacagcgtgccggcatcgaacagatgaaccaggcgatcacggaaatggac
gccatcacgcagcagaatgccgctttggtcgagcagtccgctgccgcggcggaatcgctg
caggagcaagcggagaaacaatggcacctggtcggcgcgttcaagctggccgcggcagaa
cgctctgcgagattgctgcactaa
Noviherbaspirillum sp. UKPF54: FAY22_15950
Help
Entry
FAY22_15950 CDS
T06116
Name
(GenBank) PAS domain S-box protein
KO
K03776
aerotaxis receptor
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok02020
Two-component system
nok02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FAY22_15950
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FAY22_15950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
nok02035
]
FAY22_15950
Bacterial motility proteins [BR:
nok02035
]
Flagellar system
Chemotaxis proteins
MCPs
FAY22_15950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MCPsignal
PAS_3
PAS
PAS_9
PAS_4
ATG17_like
DUF8567
TACC_C
TMP_3
PAS_8
DUF948
Lin0124_C
YkyA
TMP_2
Motif
Other DBs
NCBI-ProteinID:
QDZ29321
LinkDB
All DBs
Position
complement(3453699..3455252)
Genome browser
AA seq
517 aa
AA seq
DB search
MRTNLPVTQREVEISDGAMLVSTTDAQGRITHANAVFVAVSGYDYDELLGQPHNLVRHPD
VPPEAFRDMWSTIGRGRPWSGVVKNRCKNGDHYWVLANVTPVVRNGKNVGYISVRTKPTR
AQIAEAEVLYQQLRSPGNGGPRLRLHAGGVRKVGWRDWPQRVFRLSLTQRMAVALGLWLS
ALLASHLAAAGTTFGPVLDAAVLLLGAAGVLSWFHWVVAEPLKHCTNLAARIAGCNLEGD
ISADMRHPIGKLIRNIRLINLNMQAIVEDVRAEVSSITAAAEEIDQGSNHLAEHSEEQSS
SVERTASAMEEITSVVQQTAGAARQVENNTQEVSRTASTGGASVADLVKTMKSINDASGR
VTEVIKVIESIAFQTNILALNAAVEAARAGEMGKGFAVVAGEVRVLANRSAESAKEIRAL
ITTSSDQVDQGSHHVHSAAEIINSMVRSVSDVTTLVQEITHAANEQSMGVSEVNRAISDI
ERTTQQNAALAQQNATTSKRLKQQAGTLHRAVQIFRR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccaacctgccagttactcagcgtgaagtcgagataagcgacggtgccatgctg
gtttcgaccaccgacgcccaaggccgcatcacccacgccaatgccgttttcgttgctgtc
agcggctacgactatgacgaactgctagggcagccacacaacctggtgcgccatcccgac
gtgccgccagaagcgttccgcgacatgtggtccacgatcggccgcggccgcccctggtcg
ggtgtggtgaagaaccgctgcaaaaacggtgaccactactgggtgctggcaaatgtgacc
ccggtggtccgtaacggcaaaaatgtcggctatatttcggtacggaccaagcctactcgc
gcgcagatcgccgaggccgaagtcctgtaccagcaactccgcagtcccggaaatggcggg
ccacgcctgcgcctgcatgccggcggcgtacgcaaggtgggctggcgcgactggccccag
cgcgtgttccgcctgtcgctgacccaacgcatggccgtggcgctgggcctgtggctatcg
gccctgctggccagccacctggccgcagccggcacgaccttcgggccggtgctcgacgcc
gccgtactgctgctgggcgcagccggtgtgctcagctggttccactgggtcgtggccgag
cccctgaagcactgtaccaatctggctgcgcgcatcgccggctgcaatctggagggcgac
atatccgccgacatgcgccacccgatcggcaagctgatccgaaacattcgcctgattaat
ctgaacatgcaggcgatcgtcgaagatgtgcgcgcggaagtgtcgagcatcacggcagcc
gccgaggaaattgaccagggcagcaaccacttggccgagcactcggaagaacagtcgtcc
agcgtggagcggaccgcgtcggccatggaagagatcacctcggtggtgcagcaaacagcc
ggcgcggcgcggcaggtggaaaacaatacgcaggaagtcagtcgcacggccagtaccggc
ggcgcctcggtggcagacctggtgaagaccatgaaatcgattaacgacgcgtcagggcgg
gtgactgaagtcatcaaggtgatcgagagcattgccttccaaaccaacatcctcgcgctg
aatgcggcggtggaggcggcgcgggcgggcgaaatgggcaagggctttgccgtggttgcc
ggtgaagtgcgcgtcctggccaaccgcagcgccgaatcggccaaagagattcgcgccttg
atcacgacctccagcgatcaggtcgaccaaggttcgcaccatgtccactcggccgcagag
atcatcaactctatggtgcgctccgtatcggacgtaaccaccctggtgcaggagattacg
cacgcggccaacgagcaatcgatgggcgtgagcgaggtcaatcgcgccatcagcgacatc
gaacgcaccacccagcaaaacgccgccttggctcagcaaaacgccaccaccagcaaacgt
cttaaacaacaggccggtacgctgcaccgtgcggtacagatcttccgccgctga
Noviherbaspirillum sp. UKPF54: FAY22_17710
Help
Entry
FAY22_17710 CDS
T06116
Name
(GenBank) PAS domain S-box protein
KO
K03776
aerotaxis receptor
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok02020
Two-component system
nok02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FAY22_17710
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FAY22_17710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
nok02035
]
FAY22_17710
Bacterial motility proteins [BR:
nok02035
]
Flagellar system
Chemotaxis proteins
MCPs
FAY22_17710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TarH
4HB_MCP_1
PAS_3
PAS
PAS_9
PAS_4
PAS_8
Motif
Other DBs
NCBI-ProteinID:
QDZ29636
LinkDB
All DBs
Position
complement(3822849..3824525)
Genome browser
AA seq
558 aa
AA seq
DB search
MKKNFPITGQEKDFPDGLTLVSRTDTKGVITFANDAFVEVSGFAREELVGASHNLVRHPD
VPAAIFEDMWATLKKGLPWRGLVKNRCKNGDHYWVDAQVVPVRKNGATIGYMSVRSKPAR
EAIAKAEADYREAERSGRVQRQDGQRGWKKCLSVKNGVTLGIVFVTLMMIAGGILGITGL
TLSSSAMRGLYYEQMAPVQAIGRINFLMADNRARIVLAVREQSAGPDAAASLAKHMAQLT
RNRQEIDALWADYGKLARSGTERELAERYWQARTRYVEAGLLPAQLALEKGDAARAQALM
VESVNPLYDEANSRAEALLGFLSKKAQANFAAVAERNEAICIVAVIGISAGCLILLLAGV
YFFRATVLPLQAAVVALERIGEGNLSGESGVAGYGEPGRVMAGVAMMRLHLKVMMNEIRQ
SSGSIREQCTRLNQTMMNLAQHSEEQHDRVYHTLDSANAASEGLAGLAQDAERMLCLTES
APGGQDPARQDEQLPLLARELVAAARLQAFAMDETVEQMNQVASLIVENRGEVQRAWAAS
ERLEQTAGELDGLVRYFD
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaattttcccattaccggccaggagaaggacttcccggacgggctgaccctg
gtgtcgcgcaccgacaccaagggcgtcatcaccttcgccaacgacgcgtttgtcgaagtc
agcggattcgcgcgcgaggaactggtcggcgccagccacaatctcgtgcgccatccggac
gtgccggcggcgatcttcgaagacatgtgggctacgttgaaaaagggcttgccgtggcgc
ggattggtgaagaaccgctgcaagaacggcgaccattactgggtcgacgcgcaggtggtg
ccggtccgcaagaacggcgcgaccatcggctacatgtcggtacgcagcaaaccggcgcgc
gaggcgattgccaaggccgaggccgattaccgggaggcggaacgcagcgggcgcgtgcag
cgccaggacgggcagcgcggctggaagaaatgcctgtcggtgaaaaacggcgtcacgctc
ggcatcgtgttcgtcaccctgatgatgattgccggcggcattctcggcatcaccgggctg
accctgtcgagcagcgcgatgcgcgggctgtattacgagcagatggcgccggtgcaggcg
atcggccgcatcaatttcctgatggccgacaatcgcgcgcgcatcgtgctcgcggtgcgc
gaacagagcgcgggaccggatgcggcggcatcgctggcgaagcacatggcgcagctcacg
cgcaaccgccaggagatcgatgcgctgtgggccgattacggcaagctggcgcgcagcggc
accgagcgcgagctcgccgagcgctactggcaggcgcgcacgcgctatgtcgaagccggg
ctgctgccggcgcagcttgcgctggaaaagggcgatgcggcgcgcgcgcaggcgctgatg
gtggagagcgtcaaccccttgtacgatgaagccaacagccgcgcggaggcgctgctcggc
ttcctgtcgaagaaggcgcaagccaatttcgcggcggtggccgagcgcaacgaagcgatc
tgcatcgtggccgtgatcggtatttccgccggttgcctgattctgcttttggccggcgtg
tacttcttccgtgccaccgtgctgccgctgcaggcggcggtggttgcgctggaacgcatc
ggcgagggcaacctttccggagaaagcggcgtcgccggttacggcgagccggggcgggtg
atggccggggtggcgatgatgcgattgcacctgaaggtgatgatgaatgaaatccgccag
tcgtccggctcgatccgtgaacaatgcacgcgcctgaatcagaccatgatgaatctggcg
cagcactcggaggagcagcacgaccgcgtgtatcacacgctggacagcgccaatgccgcg
agcgaaggattggccgggctggcgcaggatgcggagcgcatgctgtgtctgacggaaagc
gcaccgggcgggcaagatccggcgcggcaggacgagcagttgccgctgctggcgcgtgaa
ctggtggccgccgcgcggctgcaggcgtttgcgatggacgagacagtcgagcagatgaat
caggtggcgtcgctgatcgtcgaaaaccgcggcgaagtgcagcgcgcatgggcggcttcg
gagcggctggagcagaccgcgggcgagctcgatggcttggtcaggtatttcgattga
DBGET
integrated database retrieval system