KEGG   Noviherbaspirillum sp. UKPF54: FAY22_13225
Entry
FAY22_13225       CDS       T06116                                 
Name
(GenBank) PAS domain S-box protein
  KO
K03776  aerotaxis receptor
Organism
nok  Noviherbaspirillum sp. UKPF54
Pathway
nok02020  Two-component system
nok02030  Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:nok00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FAY22_13225
 09140 Cellular Processes
  09142 Cell motility
   02030 Bacterial chemotaxis
    FAY22_13225
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:nok02035]
    FAY22_13225
Bacterial motility proteins [BR:nok02035]
 Flagellar system
  Chemotaxis proteins
   MCPs
    FAY22_13225
SSDB
Motif
Pfam: MCPsignal PAS_3 PAS_9 PAS HAMP PAS_4 ATG17_like HmpF HAMP_2 PTS_EIIC SKA1 PAS_8 ATG14
Other DBs
NCBI-ProteinID: QDZ28829
LinkDB
Position
2863682..2865265
AA seq 527 aa
MRKNLPVTGAEYILKDSETIVSKTDLKGKITYVNRDFIDISGFSEEELLGAPQNIVRHPD
MPPQAFEDFWRTLKSGKAWTGLVKNRCKNGDHYWVEANAAPIIENGKVTGYTSIRIKPSR
EQVEAAEAAYRTINAGDKTLEIREGMAVRRSPLDRLNIAHKLSLKRKMGMAFGILALLFA
ANGAAAMGLANGTTALATAGAGLLLAILFNTMLHSNIVAPLERARRDIERMSMGDLSCKI
ESAGDNEISRLLQSIRILQTNVKLLVGQIKEATDLVNRGSREIATGNADLSARTESQASS
LEETASSMEELTSTIQQNAQSAQEANKLAESASGIAARGGAAVGQVIETMGAIKDSSRKI
ADIISVIDGIAFQTNILALNAAVEAARAGEEGRGFAVVASEVRTLAQRSAVAAGEIKTLI
VDSVEQVEAGSDLVDRAGNTMEEVVASITQLAEIMNHITLASREQRAGIEQMNQAITEMD
AITQQNAALVEQSAAAAESLQEQAEKQWHLVGAFKLAAAERSARLLH
NT seq 1584 nt   +upstreamnt  +downstreamnt
atgcgcaagaacctgccggttaccggcgccgaatacatattgaaagactcggaaacgatc
gtttcgaagaccgacctgaaaggcaagatcacctacgtcaaccgcgacttcatcgacatc
agcggcttctcggaagaggagctgctgggggcaccgcaaaacatcgtgcgccatcccgac
atgccgccgcaggcattcgaggacttctggcgcacgctcaagagcggcaaggcatggacc
ggcctggtgaaaaaccgctgcaagaacggcgatcactactgggtcgaagcgaacgccgca
cctatcatcgaaaacggcaaggtgaccggttacacgtcgatccgcatcaagccctcgcgc
gaacaggtggaggcggccgaagccgcttaccgcaccatcaatgccggcgacaagacgctg
gaaatccgcgagggcatggcggtgcgccgttcgcccctggacagactgaacatcgcgcac
aagctctccctcaaacgcaagatgggcatggcgttcggcatcctggcgctgctgtttgcc
gccaacggcgctgccgccatgggactggccaacggtacgacggcgctggcgacagcggga
gccggcctgctgctggcgatcctgttcaacaccatgcttcacagcaacatcgtcgctccg
ctggagcgcgcccggcgcgacatcgaacgcatgagtatgggcgacctgtcgtgcaagatc
gaatccgcgggagacaacgagatttcccggctcctccagtcgatccgcatcctgcaaacc
aacgtgaaacttctggtcggccagatcaaggaagcgaccgacctagtcaaccgcggatcg
cgcgaaatcgcgaccggcaacgccgacctgtcggcgcgcaccgaatcgcaggccagttcg
ctggaagagacagcctcgtccatggaggaattgaccagcacgatccagcagaatgcacaa
agcgcgcaggaggcgaacaagctggccgagtcggcctccggcatcgccgccaggggaggc
gctgcggtcgggcaggtgatcgaaacgatgggcgcgatcaaggacagttcgcgcaagatc
gccgatatcatttcggtcatcgacggaatcgccttccagaccaatatcctggcgctcaat
gccgcggtggaagccgcgcgcgcaggcgaagaggggcgcggtttcgcggtagtcgcgtcg
gaagtgcgcacgctggcgcaacgatcggccgtggccgccggggaaatcaagaccctgatc
gtcgactcggtcgaacaggtggaagccggcagcgaccttgtcgatcgggccggcaacacc
atggaagaggtcgtcgcatcgatcacgcagctggccgagatcatgaatcacatcacgttg
gccagccgcgaacagcgtgccggcatcgaacagatgaaccaggcgatcacggaaatggac
gccatcacgcagcagaatgccgctttggtcgagcagtccgctgccgcggcggaatcgctg
caggagcaagcggagaaacaatggcacctggtcggcgcgttcaagctggccgcggcagaa
cgctctgcgagattgctgcactaa

KEGG   Noviherbaspirillum sp. UKPF54: FAY22_15950
Entry
FAY22_15950       CDS       T06116                                 
Name
(GenBank) PAS domain S-box protein
  KO
K03776  aerotaxis receptor
Organism
nok  Noviherbaspirillum sp. UKPF54
Pathway
nok02020  Two-component system
nok02030  Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:nok00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FAY22_15950
 09140 Cellular Processes
  09142 Cell motility
   02030 Bacterial chemotaxis
    FAY22_15950
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:nok02035]
    FAY22_15950
Bacterial motility proteins [BR:nok02035]
 Flagellar system
  Chemotaxis proteins
   MCPs
    FAY22_15950
SSDB
Motif
Pfam: MCPsignal PAS_3 PAS PAS_9 PAS_4 ATG17_like DUF8567 TACC_C TMP_3 PAS_8 DUF948 Lin0124_C YkyA TMP_2
Other DBs
NCBI-ProteinID: QDZ29321
LinkDB
Position
complement(3453699..3455252)
AA seq 517 aa
MRTNLPVTQREVEISDGAMLVSTTDAQGRITHANAVFVAVSGYDYDELLGQPHNLVRHPD
VPPEAFRDMWSTIGRGRPWSGVVKNRCKNGDHYWVLANVTPVVRNGKNVGYISVRTKPTR
AQIAEAEVLYQQLRSPGNGGPRLRLHAGGVRKVGWRDWPQRVFRLSLTQRMAVALGLWLS
ALLASHLAAAGTTFGPVLDAAVLLLGAAGVLSWFHWVVAEPLKHCTNLAARIAGCNLEGD
ISADMRHPIGKLIRNIRLINLNMQAIVEDVRAEVSSITAAAEEIDQGSNHLAEHSEEQSS
SVERTASAMEEITSVVQQTAGAARQVENNTQEVSRTASTGGASVADLVKTMKSINDASGR
VTEVIKVIESIAFQTNILALNAAVEAARAGEMGKGFAVVAGEVRVLANRSAESAKEIRAL
ITTSSDQVDQGSHHVHSAAEIINSMVRSVSDVTTLVQEITHAANEQSMGVSEVNRAISDI
ERTTQQNAALAQQNATTSKRLKQQAGTLHRAVQIFRR
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgcgcaccaacctgccagttactcagcgtgaagtcgagataagcgacggtgccatgctg
gtttcgaccaccgacgcccaaggccgcatcacccacgccaatgccgttttcgttgctgtc
agcggctacgactatgacgaactgctagggcagccacacaacctggtgcgccatcccgac
gtgccgccagaagcgttccgcgacatgtggtccacgatcggccgcggccgcccctggtcg
ggtgtggtgaagaaccgctgcaaaaacggtgaccactactgggtgctggcaaatgtgacc
ccggtggtccgtaacggcaaaaatgtcggctatatttcggtacggaccaagcctactcgc
gcgcagatcgccgaggccgaagtcctgtaccagcaactccgcagtcccggaaatggcggg
ccacgcctgcgcctgcatgccggcggcgtacgcaaggtgggctggcgcgactggccccag
cgcgtgttccgcctgtcgctgacccaacgcatggccgtggcgctgggcctgtggctatcg
gccctgctggccagccacctggccgcagccggcacgaccttcgggccggtgctcgacgcc
gccgtactgctgctgggcgcagccggtgtgctcagctggttccactgggtcgtggccgag
cccctgaagcactgtaccaatctggctgcgcgcatcgccggctgcaatctggagggcgac
atatccgccgacatgcgccacccgatcggcaagctgatccgaaacattcgcctgattaat
ctgaacatgcaggcgatcgtcgaagatgtgcgcgcggaagtgtcgagcatcacggcagcc
gccgaggaaattgaccagggcagcaaccacttggccgagcactcggaagaacagtcgtcc
agcgtggagcggaccgcgtcggccatggaagagatcacctcggtggtgcagcaaacagcc
ggcgcggcgcggcaggtggaaaacaatacgcaggaagtcagtcgcacggccagtaccggc
ggcgcctcggtggcagacctggtgaagaccatgaaatcgattaacgacgcgtcagggcgg
gtgactgaagtcatcaaggtgatcgagagcattgccttccaaaccaacatcctcgcgctg
aatgcggcggtggaggcggcgcgggcgggcgaaatgggcaagggctttgccgtggttgcc
ggtgaagtgcgcgtcctggccaaccgcagcgccgaatcggccaaagagattcgcgccttg
atcacgacctccagcgatcaggtcgaccaaggttcgcaccatgtccactcggccgcagag
atcatcaactctatggtgcgctccgtatcggacgtaaccaccctggtgcaggagattacg
cacgcggccaacgagcaatcgatgggcgtgagcgaggtcaatcgcgccatcagcgacatc
gaacgcaccacccagcaaaacgccgccttggctcagcaaaacgccaccaccagcaaacgt
cttaaacaacaggccggtacgctgcaccgtgcggtacagatcttccgccgctga

KEGG   Noviherbaspirillum sp. UKPF54: FAY22_17710
Entry
FAY22_17710       CDS       T06116                                 
Name
(GenBank) PAS domain S-box protein
  KO
K03776  aerotaxis receptor
Organism
nok  Noviherbaspirillum sp. UKPF54
Pathway
nok02020  Two-component system
nok02030  Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:nok00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FAY22_17710
 09140 Cellular Processes
  09142 Cell motility
   02030 Bacterial chemotaxis
    FAY22_17710
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:nok02035]
    FAY22_17710
Bacterial motility proteins [BR:nok02035]
 Flagellar system
  Chemotaxis proteins
   MCPs
    FAY22_17710
SSDB
Motif
Pfam: TarH 4HB_MCP_1 PAS_3 PAS PAS_9 PAS_4 PAS_8
Other DBs
NCBI-ProteinID: QDZ29636
LinkDB
Position
complement(3822849..3824525)
AA seq 558 aa
MKKNFPITGQEKDFPDGLTLVSRTDTKGVITFANDAFVEVSGFAREELVGASHNLVRHPD
VPAAIFEDMWATLKKGLPWRGLVKNRCKNGDHYWVDAQVVPVRKNGATIGYMSVRSKPAR
EAIAKAEADYREAERSGRVQRQDGQRGWKKCLSVKNGVTLGIVFVTLMMIAGGILGITGL
TLSSSAMRGLYYEQMAPVQAIGRINFLMADNRARIVLAVREQSAGPDAAASLAKHMAQLT
RNRQEIDALWADYGKLARSGTERELAERYWQARTRYVEAGLLPAQLALEKGDAARAQALM
VESVNPLYDEANSRAEALLGFLSKKAQANFAAVAERNEAICIVAVIGISAGCLILLLAGV
YFFRATVLPLQAAVVALERIGEGNLSGESGVAGYGEPGRVMAGVAMMRLHLKVMMNEIRQ
SSGSIREQCTRLNQTMMNLAQHSEEQHDRVYHTLDSANAASEGLAGLAQDAERMLCLTES
APGGQDPARQDEQLPLLARELVAAARLQAFAMDETVEQMNQVASLIVENRGEVQRAWAAS
ERLEQTAGELDGLVRYFD
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgaaaaagaattttcccattaccggccaggagaaggacttcccggacgggctgaccctg
gtgtcgcgcaccgacaccaagggcgtcatcaccttcgccaacgacgcgtttgtcgaagtc
agcggattcgcgcgcgaggaactggtcggcgccagccacaatctcgtgcgccatccggac
gtgccggcggcgatcttcgaagacatgtgggctacgttgaaaaagggcttgccgtggcgc
ggattggtgaagaaccgctgcaagaacggcgaccattactgggtcgacgcgcaggtggtg
ccggtccgcaagaacggcgcgaccatcggctacatgtcggtacgcagcaaaccggcgcgc
gaggcgattgccaaggccgaggccgattaccgggaggcggaacgcagcgggcgcgtgcag
cgccaggacgggcagcgcggctggaagaaatgcctgtcggtgaaaaacggcgtcacgctc
ggcatcgtgttcgtcaccctgatgatgattgccggcggcattctcggcatcaccgggctg
accctgtcgagcagcgcgatgcgcgggctgtattacgagcagatggcgccggtgcaggcg
atcggccgcatcaatttcctgatggccgacaatcgcgcgcgcatcgtgctcgcggtgcgc
gaacagagcgcgggaccggatgcggcggcatcgctggcgaagcacatggcgcagctcacg
cgcaaccgccaggagatcgatgcgctgtgggccgattacggcaagctggcgcgcagcggc
accgagcgcgagctcgccgagcgctactggcaggcgcgcacgcgctatgtcgaagccggg
ctgctgccggcgcagcttgcgctggaaaagggcgatgcggcgcgcgcgcaggcgctgatg
gtggagagcgtcaaccccttgtacgatgaagccaacagccgcgcggaggcgctgctcggc
ttcctgtcgaagaaggcgcaagccaatttcgcggcggtggccgagcgcaacgaagcgatc
tgcatcgtggccgtgatcggtatttccgccggttgcctgattctgcttttggccggcgtg
tacttcttccgtgccaccgtgctgccgctgcaggcggcggtggttgcgctggaacgcatc
ggcgagggcaacctttccggagaaagcggcgtcgccggttacggcgagccggggcgggtg
atggccggggtggcgatgatgcgattgcacctgaaggtgatgatgaatgaaatccgccag
tcgtccggctcgatccgtgaacaatgcacgcgcctgaatcagaccatgatgaatctggcg
cagcactcggaggagcagcacgaccgcgtgtatcacacgctggacagcgccaatgccgcg
agcgaaggattggccgggctggcgcaggatgcggagcgcatgctgtgtctgacggaaagc
gcaccgggcgggcaagatccggcgcggcaggacgagcagttgccgctgctggcgcgtgaa
ctggtggccgccgcgcggctgcaggcgtttgcgatggacgagacagtcgagcagatgaat
caggtggcgtcgctgatcgtcgaaaaccgcggcgaagtgcagcgcgcatgggcggcttcg
gagcggctggagcagaccgcgggcgagctcgatggcttggtcaggtatttcgattga

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