Noviherbaspirillum sp. UKPF54: FAY22_13405
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Entry
FAY22_13405 CDS
T06116
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok00521
Streptomycin biosynthesis
nok00523
Polyketide sugar unit biosynthesis
nok00525
Acarbose and validamycin biosynthesis
nok00541
Biosynthesis of various nucleotide sugars
nok01100
Metabolic pathways
nok01110
Biosynthesis of secondary metabolites
nok01250
Biosynthesis of nucleotide sugars
Module
nok_M01026
dTDP-Qui4NAc biosynthesis, Glc-1P => dTDP-Qui4NAc
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FAY22_13405 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FAY22_13405 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FAY22_13405 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FAY22_13405 (rfbB)
00525 Acarbose and validamycin biosynthesis
FAY22_13405 (rfbB)
Enzymes [BR:
nok01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FAY22_13405 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
DUF6092
Motif
Other DBs
NCBI-ProteinID:
QDZ28863
UniProt:
A0A5B8N7X9
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Position
complement(2911644..2912705)
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AA seq
353 aa
AA seq
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MIFVTGGAGFIGSNFVLDWLMGQEEVVNFDKLTYAGNLANLASLKGDSRHIFVRGDICNF
AHVSDLLEVYKPRAIVHFAAESHVDRSIDGPAAFIETNIVGTFRLLEAARIYWAALEASD
KANFRFLHVSTDEVYGSLNVTDPAFRETNRYEPNSPYSASKASSDHLVRAYHHTYGLPVL
TTNCSNNYGPYHFPEKLIPLMIVNALAGKELPVYGDGQQVRDWLYVKDHCSGIRRVLEAG
VVGETYNIGGWNEKTNLDVVKTLCNILDELCPRKDGASYSMQIKFVKDRPGHDRRYAIDA
TKIESELGWKPAETFESGIKKTVRWYLDNQDWVRDVQSGAYREWMEKNYGGRS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgattttcgtaacgggtggggcgggctttatcggctcaaatttcgtgctggattggtta
atggggcaggaggaggtcgtcaattttgacaagcttacttatgccggtaatcttgctaat
ctggcatccttgaagggcgattctcgccacattttcgtccgtggagatatttgtaatttt
gcccatgtaagcgatctgttagaggtgtacaagcccagagcaattgttcattttgccgcg
gagtcgcatgtggatcgttccattgacgggccagcagctttcattgagacgaacattgtc
ggcacttttcgattgctcgaggctgcgcgcatctactgggcagcccttgaggcgagtgat
aaggcgaatttccgcttcctgcatgtctcgacagatgaggtttatggttctctgaatgtc
accgatccggcatttagagaaaccaatcgctatgagccgaatagtccttactcggcgagc
aaagcaagcagcgatcatctggtgcgagcctaccaccatacttacggactgcccgtcctg
accaccaactgctcaaacaactacgggccatatcattttcctgagaagctaattccgctg
atgatagtcaacgcattggctggaaaagaattgccggtatacggggacggtcagcaagtt
cgagactggttgtatgtaaaagatcactgtagcgggatccgaagggttttggaggctggt
gtagtgggggagacatataacatcggtgggtggaatgaaaaaaccaatcttgatgttgtg
aaaacgctctgcaatattctggacgagctgtgcccgcgcaaagatggcgcgagctattcg
atgcaaataaagttcgtcaaggatcgccctggtcatgatcggcgttacgccatcgatgcg
accaagatcgagtccgagttgggttggaaacctgcggaaacatttgaatcggggattaaa
aaaacggtccgctggtatctcgataatcaggattgggtgcgtgatgtacagtccggggca
taccgtgaatggatggaaaagaattacggcggacgcagttga
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