Noviherbaspirillum sp. UKPF54: FAY22_14455
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Entry
FAY22_14455 CDS
T06116
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FAY22_14455 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nok03400
]
FAY22_14455 (mutM)
Enzymes [BR:
nok01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FAY22_14455 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FAY22_14455 (mutM)
DNA repair and recombination proteins [BR:
nok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FAY22_14455 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
PSMbeta
RNHCP
DUF7573
Motif
Other DBs
NCBI-ProteinID:
QDZ29050
UniProt:
A0A5B8N6S0
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Position
complement(3150678..3151499)
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AA seq
273 aa
AA seq
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MPELPEVEVTRRGVAPHLEGRVVTAVNVRHSGLRWPFPPDLNKHLCGRRIRSTGRRGKYL
LIGFEHGTLIVHLGMSGHLRILPSGVAPQKHDHFDLEVGDHVLRMTDPRRFGAVLWHGRE
DGAIEEHLLLRGLGAEPLEPGFSAELLYCQTRKRSAAIKQVLLAGDIVVGVGNIYASESL
FKAGINPKTPAHRIGIGRYAKLAQAIRETLAAAIEQGGSTLRDFVGVDGRSGYFQQSYFV
YDRTGEACRLCGTAVRQIKQGQRSTFYCPNCQK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacccgaggttgaagtaacgcggcgcggcgtcgcgccccatttggagggg
cgtgtcgtcactgccgtaaatgtgcgccacagtggcttgcgctggccttttccgccggat
ttgaacaagcacctgtgcgggcgccgcatccggtctactgggcgtcgcggcaagtacctg
ttgattggtttcgagcacggcaccctgattgtgcacttggggatgtccggccacttgcgc
attttgccaagcggcgtcgcgccgcaaaaacacgaccattttgatttggaagttggcgat
cacgttttgcgcatgacggatccgcgccgtttcggcgcagtgttatggcatggccgggaa
gacggggcgatcgaggagcatctgctgctgcgcggcttgggcgccgagccgctggagcca
ggcttttcggcggagctgctgtattgccagacgcgtaagcgcagtgccgccatcaagcag
gtgttgttggccggcgacattgtcgtcggggtaggcaatatctatgcgtccgagagtttg
ttcaaggccggcatcaatcccaagaccccggcgcatcgcattggaatcggccgctatgcc
aaactggcgcaggcgatccgggaaacgctggctgccgccatcgagcagggcggcagtacg
ttgcgcgattttgtcggtgtcgatgggcgctcgggctatttccaacaaagttatttcgtc
tacgacaggacgggcgaagcctgccggctatgcggcacggcagtgcgccagatcaagcag
ggacagcgttcgaccttttactgcccaaattgtcaaaaatga
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