KEGG   Noviherbaspirillum sp. UKPF54: FAY22_14890
Entry
FAY22_14890       CDS       T06116                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
nok  Noviherbaspirillum sp. UKPF54
Pathway
nok00300  Lysine biosynthesis
nok00470  D-Amino acid metabolism
nok01100  Metabolic pathways
nok01110  Biosynthesis of secondary metabolites
nok01120  Microbial metabolism in diverse environments
nok01230  Biosynthesis of amino acids
Module
nok_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:nok00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    FAY22_14890 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    FAY22_14890 (dapF)
Enzymes [BR:nok01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     FAY22_14890 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF DUF4514
Other DBs
NCBI-ProteinID: QDZ29130
UniProt: A0A5B8N6Z7
LinkDB
Position
3239900..3240751
AA seq 283 aa
MKLKFTKMHGAGNDFVVIDGINQQIDFTPAQWQQLADRRFGVGADQMLVVEKPQSADVDF
RYRIYNADGGEVEQCGNGSRAFVKFVTDKGLTDKRTIRVETMSGVIEPRLEADGSITVDM
GAPVLEPERVPFNATGLQGRREGDDLLWPLDVNGKTDWFSVVSMGNPHAVQVVDDAQAAA
VELDGPAIEHHLRFPRRVNAGFMQIVDRHSIRLRVFERGAGETLACGTGACAAVVAGIRR
GLLDSPVKVATRGGELSIAWAGPGNSVMLTGPAVSVFEGEIEL
NT seq 852 nt   +upstreamnt  +downstreamnt
atgaaactcaaattcaccaagatgcatggcgccggcaacgacttcgtcgtgatcgacggg
atcaaccagcagatcgacttcacaccggcgcaatggcagcagctggctgaccgccgtttc
ggcgtgggcgccgaccagatgctggtggtcgaaaagccgcaatcagcggacgtcgatttc
cgctaccgcatctacaacgccgacggtggcgaggtcgagcaatgcggcaacggctcgcgc
gcgttcgtcaaattcgtcaccgacaagggcctcaccgacaagcgcacgatcagggtggaa
accatgtcgggcgtaatcgagccgcgactggaagccgacggcagcattacggtggacatg
ggcgcgccggtgctggaaccagagcgcgtaccgttcaacgcgaccggcttgcagggaagg
cgcgaaggcgacgacctgctctggccactcgacgtcaatggcaagactgactggttctcc
gtggtttcgatgggcaatccgcatgccgtgcaggtcgtcgacgatgcgcaggctgccgcc
gtggaattggacggcccggcaatcgagcatcatctgcgcttccccaggcgggtcaacgcc
ggcttcatgcagatcgtcgatcgtcacagcatccggttgagggtattcgagcgcggtgcg
ggcgaaacacttgcctgcggcaccggcgcctgcgctgccgttgtcgccggcatccggcgc
ggcctgctggactcgccagtgaaggtggcaacgcgcggcggagagttgtcgatcgcctgg
gccggcccgggcaattcggtcatgctgacgggtcctgcagtcagcgtattcgaaggcgaa
atagagctgtga

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