Noviherbaspirillum sp. UKPF54: FAY22_15275
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Entry
FAY22_15275 CDS
T06116
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok00550
Peptidoglycan biosynthesis
nok01100
Metabolic pathways
nok01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FAY22_15275 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FAY22_15275 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nok01011
]
FAY22_15275 (mrdA)
Enzymes [BR:
nok01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FAY22_15275 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
nok01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
FAY22_15275 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
YLR049C_C
Motif
Other DBs
NCBI-ProteinID:
QDZ29202
LinkDB
All DBs
Position
complement(3309846..3311828)
Genome browser
AA seq
660 aa
AA seq
DB search
MTEFKNTERELHLFRMRLSAVGVFVLICFGLLLARFLWLQLFKHNDYAAQAEENRISVIP
VVPNRGLILDRNGVVLARNFSAYTLEITPSKIQGDLDNVIDELSTLVDIQPKDRKRFRKL
REESKNFESTPIRTRLTDEEVARFTAQRYRFPGVEIQARLFRQYPLGQTASHVIGYIGRI
NQREAENIEEMEDAANYSGTEHIGKEGLEKSYEKQLHGTTGYEEVEVSAGGRAVRTLSRT
PASPGNNLILSVDIELQKIVEEAFGDRRGALVAIEPATGDILAYVSMPTFDPNLFVDGID
AQSWEELNNSPDRPLVNRPLTGSYPPGSTYKPFMALAALELGKRTPSATVYDPGYFWFGN
HKFRDDKEGGHGTVDMYKSIVHSCDTYYYMLANDLGVDTMHDFMKPFGFGQITGIDLEHE
RRGLLPSTAWKRNAYKRPEQRKWYAGETISLGIGQGYNSFTPLQLAHAVANLANNGVVMK
PHLVKIIENGVTKERAVTVPKESYRIKLKQENIDIIKHAMVGVTKEGTSARVFANAGYES
AGKTGTAQVVGIKKNEKYDAKKVGERMRDHSLYTAFAPADNPKIAIALIVENGGFGAEAA
APIVRKALDYYLLGKRPVDKDKTPADKTVAADANPTATLKAEAESIGGPKAGAETQGNKD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattcaagaacaccgaacgcgaactgcatttgttccgcatgcgattgtctgcg
gtgggtgtgttcgtgctgatctgcttcggcttgctgctggcgcgctttttgtggctgcag
ctcttcaagcacaacgattacgccgcgcaggccgaggaaaatcgcatttccgtgattccc
gtggtgccgaaccgcggcctgatcctggatcgcaacggcgtggtcctggcgcgcaatttt
tccgcctacacgctggagatcacgccgtccaagatccagggcgacctcgacaacgtcatc
gacgagctgtccacgctggtcgacatccagcccaaggatcgcaagcgcttccgcaagctg
cgcgaagagtcgaagaatttcgagagcacgccgatccgcacccgcctcacggacgaggaa
gtggcgcgctttacggcccagcgctaccgttttcccggcgtggaaatccaggcgcgcctg
ttccgccagtatccgctgggtcaaacggcttcgcatgtgatcggctatatcggccgcatc
aaccagcgggaagcggaaaatatcgaagagatggaggatgccgccaattattccggcacc
gagcacatcggcaaggaagggctggagaaaagctacgagaagcagttgcacggcaccacc
ggctacgaggaagtcgaggtatccgccggcgggcgtgcagtgcgcacgctgtcgcgcacg
cccgccagcccaggcaacaacctgatcctgtctgtcgatatcgaactgcagaagattgtc
gaagaggcattcggcgatcgccggggcgcgctcgtggctatcgaacccgccaccggagac
attcttgcctatgtatcgatgccgaccttcgaccccaatctgtttgtcgacggcatcgac
gcgcagagctgggaagagctgaacaattcgccggaccggccgctggtcaaccggccgctg
accggcagctatccgccgggttcgacctacaagccgttcatggccctggctgcgctcgag
ctcggtaagcgcacgccgagcgccaccgtctacgatcccggctatttctggttcggcaac
cacaagttccgcgacgacaaggaaggcgggcacggcaccgtcgacatgtacaagtcgatc
gtgcattcgtgcgacacctactactacatgctcgctaacgaccttggcgtggatacgatg
cacgacttcatgaagccgttcggcttcggccagatcaccggcatcgacctggagcatgag
cgccgcgggctgctgccgtcgaccgcttggaagcgcaatgcgtacaagcggccggagcag
cgcaagtggtacgccggcgagacgatttcgctcggcatcggccagggctacaactcgttt
acgcccctgcagctggcgcacgcggtcgccaatctggccaacaacggcgtcgtgatgaag
ccgcacctggtcaagatcatcgagaacggcgtgaccaaggaacgcgccgtgaccgtgccc
aaggaaagctaccgcatcaagctcaagcaggaaaatatcgacatcatcaagcatgcgatg
gtcggcgtcaccaaggagggcacgtcggcgcgcgtgttcgccaacgccggatacgagtcg
gccggcaagaccggtaccgcgcaggtggtcggcatcaagaagaacgaaaagtacgacgcg
aagaaggtgggcgaacgcatgcgcgaccattcgctgtataccgcattcgctcctgccgac
aatccgaaaatcgcgatcgcgctgatcgtggaaaacggcggcttcggcgcggaagcggcg
gcgcctatcgtgcgcaaggcgctcgactactacctgctcggcaagcgcccggtcgacaag
gacaagacgcctgcagacaagacggtcgcagcggacgccaatccgacggcgacgctgaag
gccgaggcggaatcgatcggcggccctaaggcgggcgccgaaacccagggcaacaaagat
taa
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