Noviherbaspirillum sp. UKPF54: FAY22_15640
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Entry
FAY22_15640 CDS
T06116
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
nok
Noviherbaspirillum sp. UKPF54
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nok03000
]
FAY22_15640
Transcription factors [BR:
nok03000
]
Prokaryotic type
Helix-turn-helix
Other families
FAY22_15640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_30
HTH_23
HTH_7
AAA
HTH_28
NB-ARC
Mg_chelatase
AAA_2
HTH_29
HTH_22
CUE
AAA_3
NUMOD1
AAA_16
HTH_Tnp_ISL3
HTH_38
Motif
Other DBs
NCBI-ProteinID:
QDZ30636
LinkDB
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Position
3387491..3389434
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AA seq
647 aa
AA seq
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MATPAAVPGAARFGALATDERGAMVEKSHRRSAAYGLGSADNPEFAPLNNSDLSLVIEHN
RALYKYALPVMETLYEQIINTHNMVILTDAQGVIMHTLGDDDFLEKANRVALTAGVAWSE
QKRGTNAIGTAIAEGIPTLVHADEHYLRANHILTCSAAPIFDPRGAVIGVLDVTGDRQSF
HRHTMALVRMSAQMIENQLFTAAYQDGITLHFHTQPEFIGTLMEGIVSFTPGGRFVSANR
SALFNLGLSPQALSVHTLNSLFGLGVSALLDHYRTAAPELLQMCLPSGVRVYAKASVRLS
NSTICGAELVRAPAASTPPPRRAEQAQDDGGRRLSSLRYLNTGDPQVAAIIGKLTKVNGR
DIPILINGETGTGKELLAQAIHNDSPRANGPFVAVNCASIPETLIESELFGYEDGAFTGA
RKKGSIGRILQANGGTLFLDEIGDMPLNLQARLLRVLQERMVTPLGSAKSIPVNVALICA
THRNLRDMIAKGEFREDLYYRLNGLVVKLPPVRERSDFELVVNKLLACESNGRRYHVAPD
VMQLFQQHNWPGNFRQLTNLLRTAMVMTGDDGEIRLEHLPDDFLEDVQSMKKDSPPPLAA
DALPANTTLGDVELSVIQKALQAHGGNVSATARALGISRNTIYRKLC
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcctgccgcggtgccgggcgcagcgcgcttcggcgcacttgccacggacgag
cgcggcgccatggtcgaaaaatcccaccggcgctccgccgcctacggcctgggcagcgcc
gacaatccggaatttgcccctctgaacaattccgacctgtcgctcgtcatcgagcacaac
cgcgcgctgtacaagtacgcgctgccggtgatggagacgctgtacgaacagatcatcaat
acccacaacatggtgatcctgaccgatgcgcaaggggtgatcatgcataccctgggcgac
gacgacttcctggaaaaggccaaccgcgtcgcgctcaccgccggcgtggcatggtcggaa
cagaagcgcggcaccaacgcgatcggcactgccattgccgaaggcatcccgaccctggtg
catgccgacgaacattatctgcgcgccaatcacatcctgacctgctcggccgcgccgatc
ttcgacccgcgcggcgcggtgatcggcgtgctggacgtgaccggcgaccgccagagcttc
caccgccacacgatggcgctggtgcgcatgtcggcccagatgatcgagaatcaattgttt
accgccgcctaccaggacggcattacgctgcatttccacacccagccggaattcatcggc
acgctcatggaaggcatcgtgtcgtttacgcctggcgggcgtttcgtgtccgccaaccgc
agcgcgctgttcaatctcggactgtctccgcaagcgctgtctgttcatacgctcaactcc
ctgttcggcctgggtgtgtccgcgctgctcgatcattaccgcaccgccgcccccgagctg
ctgcagatgtgcctgcccagcggcgtgcgcgtgtacgccaaggcatcggtgcgcctgtcc
aacagcaccatctgcggcgccgaactggtgcgcgcgccggcagccagcacgccgccgccc
cggcgcgccgagcaggcgcaggacgatggcggacggcgcctgtccagcctgcgctacctg
aacacgggcgacccgcaggtcgccgccatcatcggcaagctcaccaaggtcaacggccgc
gacatcccgatcctgatcaacggcgaaaccggcaccggcaaggagttgctggcgcaggcg
atccacaacgattcgccgcgcgcgaacgggcctttcgtggcggtcaactgcgcgtcgatc
ccggaaacgctgatcgaatccgaactgttcggctacgaggacggcgccttcacaggcgcg
cgcaagaagggctcgatcggccgcatcctgcaagccaacggcggcacgctgttcctggac
gagatcggcgacatgccgctgaacctgcaggcgcgcctgctgcgcgtgctgcaggagcgc
atggtcacgccgctgggcagcgccaagtcgatcccggtgaatgtcgcgctgatctgcgcc
acgcaccgcaacctgcgcgacatgatcgccaagggcgaattccgcgaagacctgtactat
cgcctcaacggcctggtagtcaagctgccgccggtacgcgagcgcagcgacttcgagctg
gtggtcaacaagctgctcgcctgcgaatccaacggccgccgctatcatgtcgcaccggac
gtgatgcagctgttccagcagcataactggccgggcaacttccgccagctcaccaaccta
ctgcgcacggccatggtgatgaccggcgacgacggcgaaatccggctcgagcacctgccg
gacgacttcctcgaagatgtgcagagcatgaagaaggacagtcccccgcccttggccgcc
gacgctctcccggccaataccacgctgggcgacgtcgaactgtctgtgatccagaaggcg
ctgcaggcgcacggcggcaacgtatcggccaccgcgcgcgcgctcggcatttcgcgcaac
acgatttatcgcaagctgtgctga
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