Noviherbaspirillum sp. UKPF54: FAY22_17365
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Entry
FAY22_17365 CDS
T06116
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok03420
Nucleotide excision repair
nok03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FAY22_17365
03430 Mismatch repair
FAY22_17365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nok03400
]
FAY22_17365
Enzymes [BR:
nok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FAY22_17365
DNA repair and recombination proteins [BR:
nok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FAY22_17365
MMR (mismatch excision repair)
Other MMR factors
FAY22_17365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
NNH1
AAA_12
nSTAND3
DEAD
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QDZ29575
UniProt:
A0A5B8N940
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All DBs
Position
3739173..3740957
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AA seq
594 aa
AA seq
DB search
MLDRELVYAAIADMRENREQHDAIHEMQHCVVLAGPGSGKTKTLTAAIARALLDDVFEPR
GVACITYNNECALELEGRLAKLGIEPSSRIFIGTVHGFALSQVISPYARCVLPELPPIFR
VATEAERRGIVEDAYKTIFGSAGDPHQMWRFAVEKRLRQVNRDAPSWRGRNPELARFVEE
YERQLHAQGLIDFDDMPLLAYRMIAKHRWIAEALEARFPVLFVDEYQDLGHALHELVLKL
CFDGRMRLFAVGDVDQSIYAFTGANPQLLAGLAERPDVKTYRLRFNYRSGTTIINASMAA
LGEDRGYVAPNGTSTGVVEFRAHSGDTQDQARDIAENLVPQLIERGFAPEEIAILYREAS
LGSDMALALAWMNLPFVRADNQALVKRSSRLARFVEACARWVTGGWKEANPLFRRLADEA
VNLVKGPYATNDERHAVHLQLIEFLQKSIGVDETAHLWLIRLRDTLITPWAQSAADLTED
WKTIDLMIERTASSSPNENMPLAHLGGRIEGGGRINLSTLHSAKGREFDAVILFAMNSDV
IPSWRDRTPEAVKEARRLFYVGVTRPRKELHVCFRAKQNSPWVKELFDRLHPSS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatcgagagctagtttatgccgcgattgcggatatgcgggagaaccgggagcaa
cacgatgctatccacgaaatgcagcattgtgttgtgcttgcgggccctggaagcggcaag
acgaaaacgttaacagccgcaattgcgcgggcgctattggatgatgttttcgagcctaga
ggagtcgcctgcatcacctacaacaatgaatgcgccttggagcttgagggccgcctggcg
aaactgggaatcgaaccaagcagccgcatctttatcggtacggttcacggatttgcccta
tcgcaggtaatcagcccctatgcgcgctgcgtcttgccggaactgcctccaatcttccgt
gttgccaccgaagcggaacgccgcggcattgtggaagatgcatacaaaaccatcttcggg
agtgctggcgacccgcatcaaatgtggcgtttcgctgttgagaagcgtttgcgtcaggta
aatagagacgccccgtcatggcgcgggcgcaatcccgaactggcccgcttcgtcgaagag
tacgagcggcaactgcacgcacagggattgattgactttgatgacatgccattgcttgcc
tatcgaatgatcgccaaacaccgctggatcgcggaggcgctcgaagctcgctttcccgtc
ctgtttgtcgacgaatatcaggaccttggccatgctctacacgaattagttctaaagctt
tgttttgacggtcggatgcggctatttgcagtcggcgatgttgaccaatccatctatgca
tttacgggtgccaatccacagttgctggctggcctcgctgaaagacctgatgtaaaaact
taccgactacggttcaattatcgctccggcacgacgatcatcaacgcctccatggcagct
cttggtgaggatcgcggctatgttgcaccgaacggtacgagcacaggagtagtggagttt
cgcgcgcactcaggagacacacaggatcaggcccgagacattgcagaaaatctggttccc
cagctaatcgagcgaggctttgcgcctgaagaaattgcgatcctctaccgagaagcgtcc
ctaggatccgatatggccctggcattagcatggatgaacttgcctttcgtccgcgccgac
aatcaggctttggtgaaaagaagctcgcggcttgcgcgcttcgtcgaggcttgcgcgcgg
tgggtaacaggtgggtggaaggaagccaatccgctatttcgccggctggccgacgaggcc
gtgaaccttgttaaggggccatatgctacgaatgatgaacggcacgcggtccatttgcaa
ttaattgaatttttacagaaaagcattggtgtcgatgagacggcacatctctggttgatc
cggctccgcgatacgctcatcacgccatgggctcaaagcgcggccgatcttaccgaagac
tggaaaacgatcgacttgatgattgaacggaccgcttcatcctcacccaatgaaaatatg
ccacttgcacatttaggaggacgcattgaaggcggtggacgcatcaacttgagtacgctg
catagcgccaaaggacgagagtttgatgcagtgattctgtttgcgatgaacagcgacgta
attccaagttggagggataggacaccagaggcagtcaaagaagcccggagacttttttac
gtcggtgtgacccgcccgcgcaaagagttgcacgtctgctttcgagcgaaacaaaattcg
ccatgggtcaaagaactttttgaccggctgcatccctcgtcttga
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