Noviherbaspirillum sp. UKPF54: FAY22_21670
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Entry
FAY22_21670 CDS
T06116
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok03030
DNA replication
nok03410
Base excision repair
nok03420
Nucleotide excision repair
nok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAY22_21670 (polA)
03410 Base excision repair
FAY22_21670 (polA)
03420 Nucleotide excision repair
FAY22_21670 (polA)
03440 Homologous recombination
FAY22_21670 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nok03032
]
FAY22_21670 (polA)
03400 DNA repair and recombination proteins [BR:
nok03400
]
FAY22_21670 (polA)
Enzymes [BR:
nok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAY22_21670 (polA)
DNA replication proteins [BR:
nok03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FAY22_21670 (polA)
DNA repair and recombination proteins [BR:
nok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FAY22_21670 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FAY22_21670 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Herpes_UL46
Motif
Other DBs
NCBI-ProteinID:
QDZ30335
UniProt:
A0A5B8NB67
LinkDB
All DBs
Position
4676321..4679068
Genome browser
AA seq
915 aa
AA seq
DB search
MNKTLLLVDGSSYLYRAFHAMPDLRNAEGAPTGAIYGMINMLRRLRNDYPAAYIACVFDA
KGKTFRDDLYSEYKAHRPSMPEDLARQIEPIHEAVRALGWPILMVEGIEADDVIGTLSVQ
AVEHGMQAVVSTGDKDLAQLVNDHVTLINTMTNEKLDREGVIAKFGVPPERIVDYLTLVG
DAVDNVPGVDKVGPKTAVKWINQYGSLDGIIEHAKDVGGAVGENLRRALDWLPTARTLIT
VKTDCDLAAHMTTVPESLVAKPVDNDALIDFFRRYGFKTWLRELTGEAAGARPAAAAQAQ
NGTAQGALFDAAPATTEYETVLTEAQLARWIETIDAAPLTSVDTETTSLDAMRAQLVGIS
LCCKPGVAAYIPVAHRYQDAPTQLSRELVLEKLKPWLEDAGKPKVGQHLKYDSHIFENHG
VTLRGIVHDTLLESYVFESHKSHDMDSLALRHLNRKTITFEEVCGKGASQICFDEVAVER
ATEYAAEDADVTLQLHQAMWPQVAENEGLKFIYEKIELPTSVVLQKIERNGVLVDAQLLA
AQSHELGMRMLEMERQAYELAGQPFNLNSPKQIGEIFFDKLQLPVVKKTPSGSPSTDEEV
LQKLAENYPLPKILLDYRGLSKLKSTYTDKLPRMVNPDTGRVHTNYAQAVAVTGRLASND
PNLQNIPVRTTEGRRIREAFIAPAGSVIVSADYSQIELRIMAHISGDENLLRAFAEGEDI
HRATAAEIFGVERADVTNEQRRYAKVINFGLIYGMSAFGLASNLGIERAAAQLYIDKYFQ
RYPAVAQYMADTRTQAKAHGYVETVFGRRLWLPEINSPNGPRRQAAERAAINAPMQGTAA
DLIKLSMIAVQDWLEGERMQSKMVMQVHDELVLEVPENELPHIQHTLPELMSSVATLKVP
LIAEVGVGKNWDQAH
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaccctgttgttagttgacggctccagctacctctatcgtgcgttccatgcg
atgccggacctgcgcaacgcggaaggcgcgccgaccggcgccatctacggcatgatcaac
atgttgcggcgcttacgcaacgactatccggcagcatacattgcctgtgtattcgatgca
aaaggaaagaccttccgcgacgacttgtattcggaatacaaggcgcatcgcccgtcgatg
ccggaagacctggcacggcagatcgagccgatccacgaagcggtgcgcgcgctcggctgg
ccgatcctgatggtggagggcatcgaggccgacgacgtgatcggcacgctctcggtgcag
gccgtcgagcacggcatgcaggcggtggtgtcgaccggcgacaaggatctcgcgcagctg
gtgaacgaccatgtcacgctgatcaacaccatgaccaatgaaaagctggaccgggaaggc
gtcattgccaagttcggcgtcccgccggaacgcatcgtcgattacctgacgctggtgggc
gacgcggtcgacaacgtgccaggcgtcgacaaggtcggcccgaaaacggcggtcaaatgg
atcaaccagtacggctcgctggacggcatcatcgagcacgccaaggatgtcggcggcgcg
gtcggcgaaaacctgcgccgcgcgctcgactggcttcccactgcgcgcacgcttatcacg
gtcaagaccgactgcgacctggcggcgcacatgacgacggtcccggaatcgctggtggca
aaaccggtggacaacgacgcactgatcgacttcttccggcgctacggcttcaagacctgg
ctgcgcgagctgaccggagaagctgccggcgcgcgtcctgccgccgccgcgcaggcgcag
aacggaacggcgcagggcgccctgtttgacgccgcaccggcgaccaccgaatacgaaacc
gtgctgaccgaagcgcagctcgcgcgctggatcgagacgatcgacgccgcgccgctgacc
tcggtcgataccgaaaccacgtcgctggatgccatgcgtgcgcagctggtcggcatttcg
ctgtgctgcaagcccggcgtggctgcctacatcccggtggcgcatcgctaccaggacgcg
ccgacgcagttatcgcgtgaactcgtgctggaaaagctgaagccctggctggaagacgcg
ggcaagcccaaggtcggccagcacctcaaatacgacagccacatctttgaaaaccatggc
gtaacgctgcgcggcatcgtgcacgacacgctgctcgaatcttacgtgttcgagtcgcac
aagagccatgacatggacagcctcgcgctgcgccacctgaaccgcaagaccatcaccttc
gaggaagtgtgcggcaagggcgcgtcgcagatctgcttcgatgaagtggcagtcgaacgc
gccaccgagtacgcggcggaagacgcggacgtgacgctgcagctgcatcaggcgatgtgg
ccgcaggtggccgagaacgaggggctgaagttcatctacgaaaagatcgagctgccgacc
tcggtcgtgctgcagaagatcgagcgcaacggcgtgctggtcgacgcgcagctgctggcc
gcgcagtcgcacgagctgggcatgcgcatgctggagatggagcgccaggcctacgagttg
gcggggcagccattcaacctgaattcgccgaaacagatcggcgaaatcttcttcgacaag
ctgcagctgccggtggtgaaaaagactccgtcgggctcgccctcgaccgacgaggaagtg
ctgcagaagctggccgaaaactatccgctgccgaagatcctgctcgactaccgcggcctg
tcgaagctgaagtccacttataccgacaagctgcccaggatggtcaacccggacaccggt
cgcgtgcataccaattacgcgcaggcggtggcggtgaccggacgcctcgcgtcgaacgac
ccgaacctgcagaatatcccggtgcgcaccaccgaggggcggcgcatccgcgaagccttc
atcgcgccggcgggcagcgtgatcgtgtcggccgactactcgcagatcgagctgcgcatc
atggcgcacatctccggcgacgagaacctgttgcgcgcgttcgccgaaggcgaggacatc
catcgcgccaccgcggcggaaatcttcggcgtggagcgcgcggacgtgacgaacgaacaa
cgccgctatgcgaaggtgatcaacttcggcctgatttacggcatgagcgcgttcggcctg
gccagcaacctcggcatcgaacgcgccgccgcacagctgtatatcgacaaatacttccag
cgctatccggcggtggcgcagtacatggccgacacccgcacccaggccaaggcgcacggc
tatgtggaaaccgtgttcggccgccgcctgtggctgccggagattaattcgccgaacggc
ccgcgccgccaggcggccgagcgcgccgcgatcaacgcgccgatgcagggcaccgccgcc
gacctgatcaagctgtcgatgatagcggtgcaggactggctggaaggcgagcggatgcag
tcgaagatggtgatgcaggtgcacgacgaactggtgctggaagtgccggaaaacgaattg
ccgcatattcaacacacgctgccggaactgatgagcagcgtagcgacgctgaaagtgcct
ctgatcgcggaggtcggcgtgggcaagaactgggaccaagcacattga
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