Novosphingobium olei: NSDW_00330
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Entry
NSDW_00330 CDS
T09939
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
nol
Novosphingobium olei
Pathway
nol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NSDW_00330 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nol03400
]
NSDW_00330 (mutS)
DNA repair and recombination proteins [BR:
nol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NSDW_00330 (mutS)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
BEU98938
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Position
38699..41293
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AA seq
864 aa
AA seq
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MTPHAPTPMMAQYLALKEQAADCLLFYRMGDFFELFFDDAKTAAQVLDIALTSRGEHGGA
PIPMCGVPVHSAEGYLARLIKAGCRVAIAEQTESPEEAKKRGGSKALVARDIVRFVTAGT
LTEEALLEPRRANVLAAICPVRDGIGIAACDISTGRMELEECAPEAMGAALARLGASEVV
APEDWADAPFEMVPRPARSFDSARGESRLKDLHAVATLDGFGRFTRAMLAAACGLVDYLD
HAGRGKLPFLLPPVVREAGGHMAMDEATRASLEILSSTTGGRRGSLVEAIDRCVTGAGAR
LLAEDLSAPLTDPAAIRERLELVSWFHDDPLLRGDVRAILRAAPDVGRALGRVVAGRGSP
RDLGQLRDGLSEALRLRDLLFARADRPVLADGLLPSLGGHGALVDLFARALVPAPPTERG
QGGFIAEGYDAALDELRRSAGNSRRAIAALEAKYRDETGVAALKIRHNGVLGYFIEVPAR
HADRLMQPDSGFTHRQTMAGAVRFNALALHEEASRIAESGGHALAAEEAHFEDLVGQAVA
RREAIAATAAALARLDVAAGQAERAAEGGWSLPRVVDEPCLDIVGGRHPVVEAALAAKGE
RFVANDCALSSHDRLWLIGGPNMGGKSTFLRQNALIVLLAQAGGFVPATSATVGLVDRLF
SRVGAADNLARGRSTFMVEMVETAAILAQATERSFVILDEVGRGTSTYDGLALAWAVAEA
VHEVNRSRCLFATHYHELARLAETCPALSLHHVRAREWKGDLVLLHELAEGPADKSYGLA
VARLAGVPAPVVKRAKAVLDKLEKGRAATGGLAAGLGELPLFAAAIEAAEEKVDALREKL
DAVDIDSLSPRAALELLYELKRDI
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
gtgacccctcatgccccaactccgatgatggcgcaatatcttgcgcttaaagagcaggct
gccgactgcctgctgttctaccgcatgggcgacttcttcgagctgttcttcgacgatgcg
aagaccgccgcgcaggtgctcgacatcgcgctgaccagccggggcgaacacggcggcgcg
ccgatcccgatgtgcggcgtgccggtccattcggccgagggctacctcgcgcggctgatc
aaggccggatgccgcgtcgccattgccgaacagaccgaaagccccgaggaagccaagaag
cgcggcggatcgaaggcgctggtcgcgcgcgacatcgtccgcttcgtcaccgccggcacg
ctgaccgaagaagcgctgctcgaaccgcgccgcgccaacgtgctcgccgcgatctgtccg
gtgcgcgatggcatcggcattgccgcctgcgatatctcgaccgggcgcatggagctggaa
gagtgcgcgcccgaagcgatgggtgccgcgctggcccgccttggcgccagcgaagtagtg
gcgcccgaagactgggcagacgcgccgttcgagatggtgccgcgcccggcccgcagcttc
gattccgcgcgcggtgaaagccggctgaaagacctgcacgccgtcgccacgctcgatggc
ttcggacgcttcacccgcgccatgctggccgcggcctgtggtctcgtcgactatctcgac
catgcggggcggggcaagctgccgttcctgctgccgccggtggtgcgcgaggcgggcggc
cacatggcgatggacgaggcgacgcgggcgagcctcgaaattctgtcgagcaccaccggc
gggcggcgcggcagtctggtcgaggcgatcgaccgctgcgttaccggggcgggcgcgcgc
ctgctggccgaggacctttcagcgccgctgaccgatcctgcggcgattcgcgaacggctc
gaactggtcagctggttccacgacgatccgctgctgcgcggcgacgtgcgcgcgatactg
cgcgcggcgcccgatgttggccgcgcgctcggccgtgtggtggcggggcgcggaagcccg
cgtgatctcggccagttgcgcgatggcctgtccgaagcgctgcgcctgcgcgacctgctg
ttcgcccgcgccgatcgccccgtactggccgatgggctgctgccatcgctgggtggccac
ggcgcgctggtcgatctgttcgctcgcgcgctcgttcccgcgccgccgaccgagcggggg
cagggcggcttcatcgccgaaggatatgacgccgcactggacgaactgcgccgctcggcg
ggtaattcgcgccgcgcgatcgccgcgctggaggcgaagtaccgcgacgaaaccggcgtc
gcggcgctcaagatccggcataacggcgtgcttggctatttcatcgaagtgccggccagg
cacgccgaccggctgatgcagcccgattcgggcttcacccaccgccagacgatggcgggg
gccgtgcgcttcaacgcgctcgccctgcacgaggaagcaagccgcatcgccgaatcgggc
ggccacgcgctcgccgccgaggaggcgcatttcgaggatctggtgggccaagccgtcgcc
cggcgcgaagcgattgcggcgaccgctgcggcgcttgcccggctcgacgttgccgcaggg
caggcggaacgcgcggccgaagggggctggagcctgccccgggtggtcgatgaaccctgc
ctcgatatcgtcggcgggcggcacccggtggtggaagccgcgctggccgccaagggcgag
cgtttcgtggccaacgactgtgcgttgtccagccatgaccggctgtggctgatcggcggg
cccaacatgggcggcaagtccaccttcctgcgccagaacgcgctgatcgtgctgctggcg
caggcgggcggcttcgtcccggcgacgagcgcgacggtgggcctggtcgaccgcctgttc
agccgggtcggcgcggcggacaacctcgcgcgcgggcgctcgaccttcatggtcgagatg
gtcgagacggcggcgattctggcgcaggcgaccgagcgcagcttcgtgattctcgatgaa
gtggggcgcggcacgtcgacctacgacggcctcgcgctcgcctgggccgtggccgaggcg
gtgcacgaggtgaaccgcagccgctgcctgttcgccacgcactaccacgaactcgcgcgg
ctcgcagaaacctgcccggcgctgtcgctccaccacgtgcgggcgcgcgaatggaagggc
gatctggtcctgctgcacgaactggcggaagggcctgccgacaagagctacggccttgcc
gtggcgcggctggccggggtgcccgcgcccgtggtcaagcgggccaaggcagtgctcgac
aagctggagaaagggcgtgcggcgaccggcgggctggccgcagggctgggtgagctgccc
ctgttcgccgccgcgatcgaggcggccgaggaaaaggtcgatgccctgcgggagaagctc
gacgcggtcgacatcgattcgctttccccgcgcgcggcgctcgagctgctgtacgaactg
aagcgggacatctga
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