Novosphingobium olei: NSDW_01010
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Entry
NSDW_01010 CDS
T09939
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
nol
Novosphingobium olei
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nol03009
]
NSDW_01010
Enzymes [BR:
nol01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
NSDW_01010
Ribosome biogenesis [BR:
nol03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NSDW_01010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BEU99006
LinkDB
All DBs
Position
112899..114182
Genome browser
AA seq
427 aa
AA seq
DB search
MNKPYEPKSYNQKDDSEVRQFTIQKDDAGARLDRWFKRHLPQVGFATVSRWARTGQIRLD
GKRADVDTRLEAGQVLRVPPGGTTPASKGPRKRKPLTEEQIALAESMVLEKDRAAIVLNK
PPGLATQGGSGTYEHVDGLLDAYVGEDEPRPRLVHRLDKDTSGVLLIARTPGSAAFFSKR
FSGRSARKIYWALVMGVPDVKDGLIELPLAKQPGTGGEKMMVDESGEGQAARSRYRVISR
AGNRAAWVELQPLTGRTHQLRVHMAAIGHPIVGDGKYGGQGAFLTGTISRKMHLHARRLR
IEHPEGDLIDVTAPLPDHFAASMVSLGFHEEEGDIPLEPAKLVSEKDVAKRAAKAHAKEY
RKERRGERRKRADGGGGIARKPTGKRAGGAPAGKKAADGKPAARKPGAGKPAAGRAPAPR
KPAGPKR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagccttacgagccaaagtcctacaaccagaaggacgatagcgaagtccgccag
ttcaccatccagaaggacgatgccggggcccggctcgaccgctggttcaagcggcacctg
ccgcaggtgggctttgccaccgtttcgcgctgggcgcgcaccgggcagatccggctcgac
ggcaagcgcgccgatgtcgacacccggctcgaggcggggcaggtgctgcgcgtgccgccg
ggcgggacgacacctgcgagcaaggggccgcgcaagcgcaagcccttgaccgaggagcag
atcgcgctcgccgaatcgatggtgctggaaaaggatcgcgcggcgatcgtgctcaacaag
ccgccgggccttgcaacgcaaggcggcagcggcacctacgagcacgtcgatggcctgctc
gatgcctatgtcggcgaggacgagccgcggccgcggctcgtccaccggctcgacaaggat
acctcgggcgtgctgctgatcgcgcgcacgccaggcagcgcggcgtttttctccaagcgt
ttttcaggccggtccgcgcgcaagatctactgggcgctggtgatgggcgtgcccgatgtg
aaggacgggctgatcgaactgccgctcgccaagcagccgggcaccggcggcgagaagatg
atggtcgacgaaagcggcgaaggtcaggccgcgcgcagccgctatcgcgtgatcagccgg
gcgggcaaccgcgccgcctgggtcgagcttcagccgctgaccggccgcacccaccaactg
cgcgtgcacatggcggcgatcgggcatccgatcgtgggcgatggcaagtacggcgggcag
ggcgcgttcctgaccggcacgatcagccgcaagatgcaccttcatgcgcggcgcctgcgg
atcgagcatcccgaaggcgacctgatcgacgtgaccgcgccgctgcccgaccacttcgcg
gcgagcatggtgagcctgggcttccacgaggaagagggcgacatcccgctcgaaccggcc
aagctggtgagcgagaaggacgtcgccaagcgcgcggccaaggcgcatgccaaggaatac
cgcaaggaacgccggggcgagcggcgcaagcgcgccgatggcggcggcggcatcgcccgc
aagcccaccggcaagcgcgctggcggcgctccggcgggcaagaaggcggccgatggcaag
ccggccgcacgcaagcccggggctggcaagcctgcggcgggcagggcacccgcgccaagg
aagcccgcaggtcccaagcgctga
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