Novosphingobium olei: NSDW_01560
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Entry
NSDW_01560 CDS
T09939
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
nol
Novosphingobium olei
Pathway
nol00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NSDW_01560 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nol01007
]
NSDW_01560 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nol03016
]
NSDW_01560 (serS)
Enzymes [BR:
nol01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
NSDW_01560 (serS)
Amino acid related enzymes [BR:
nol01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
NSDW_01560 (serS)
Transfer RNA biogenesis [BR:
nol03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
NSDW_01560 (serS)
Prokaryotic type
NSDW_01560 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
BEU99061
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All DBs
Position
complement(155610..156890)
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AA seq
426 aa
AA seq
DB search
MHDIRLIRENPESFDAQLARRGVIPHGHKILGLDATVRALQTEKDNLLAERNVISKSIGR
LIADGNHDAANSAKATVEALKKSLPVLEARESEAASDLREILQALPNLPAAEVPEGEDED
GNVEVSRWGTPRDFAFAAREHADIGPALGLDFETGALISGARFTFLRGQMARLHRALAQF
MLDQQTAENGYTECLPPLLVKDEAVFGTGQLPKFAEDLFKTTDGRWLIPTAEVSLTNAVQ
GQILDHAALPLRMTALTPCFRSEAGSAGRDTRGFIRQHQFEKVELVSICRPEDSEAEHER
MTQCAEGVLQALGLPYRKMLLCAGDMGFTARKTYDLEVWLPGQGAYREISSCSNCGDFQA
RRMNARYRPEGAKGTEFVHTLNGSGLAVGRTLVAVLENYQQEDGSVDVPQALLPYTGGLT
RLVPLP
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatatccgcctgatccgcgaaaatccggaaagcttcgacgcccagctcgcccgc
cgtggggtcatccctcatggccacaagatcctcggcctagatgcgactgttcgcgctctt
caaaccgagaaggacaaccttcttgccgagcggaacgtcatatcgaagtccatcggacgc
cttatcgccgacggaaatcacgacgctgccaatagcgctaaggccaccgtagaggctctg
aagaagagcctaccggtcctcgaagcacgggaaagcgaggctgcatccgacctccgcgaa
attctgcaagcgctacccaacctccccgccgccgaagtgcccgaaggcgaggacgaggac
ggcaacgtcgaagtcagccgctggggcaccccgcgtgatttcgcctttgccgcccgcgag
cacgccgacatcggcccagccctgggcctcgatttcgagaccggcgcgctgatctcgggc
gcgcgcttcacattcctgagaggccagatggcccgcctccaccgcgcgctggcgcagttc
atgctcgaccagcagacggcagagaacggctacaccgaatgcctgcccccgctgctggtg
aaggacgaggccgtgttcggcacggggcagctgcccaagttcgccgaggacctgttcaag
accaccgacggccgctggctgatccccaccgccgaggtttcgctcaccaatgcggtgcag
ggccagatccttgaccatgccgccctgcccctgcgcatgaccgcgctcaccccctgcttc
cgttccgaagcgggctcggcggggcgcgatacgcgcggcttcatccgccagcaccagttc
gaaaaggtcgagctggtctcgatctgccgcccggaagactccgaagccgaacacgaacgc
atgacgcagtgcgccgaaggcgtgctgcaggcattgggcctgccctatcgcaagatgctg
ctctgcgccggcgacatgggcttcaccgcgcgcaagacctatgacctcgaagtctggctg
ccgggccagggcgcctatcgcgagatttcgtcgtgctccaactgcggcgatttccaggcc
cgccgcatgaacgcgcgctatcggccagagggcgcgaaaggcaccgagttcgtccacacg
ctcaacggttcgggcctcgccgtcggccgcacgctggtggcggtgctggaaaactaccag
caggaggacggctcggtcgacgtgccgcaagccctgctgccctataccggcggcctcacc
cggctggtcccgctgccgtga
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