Novosphingobium olei: NSDW_08170
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Entry
NSDW_08170 CDS
T09939
Name
(GenBank) VCBS domain-containing protein
Organism
nol
Novosphingobium olei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
Big_9
HemolysinCabind
Cadherin_5
GH43_C
Glyco_hydro_5_C
Motif
Other DBs
NCBI-ProteinID:
BEU99722
LinkDB
All DBs
Position
860549..866536
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AA seq
1995 aa
AA seq
DB search
MATTSTTPSVNTTSMFNTPQAVDDTYTFSQTYLEGLASNGIVTLSLDVMANDLGGAAKDL
WAVVDQEDTGPVTYSAAETADLISKDATGEWKTTRPGTKVAVVNGKLSYQMDASAMAVIK
ALPAGQTVTDVISYSIRLANGTLSVAEVTITIAGTNDAAVITGTSAVTITETDSALSAGS
KLNVTDVDTGEAKFQVQSNVAGNHGYGTFSIDANGNWTYSAGAHNEFAAGQSYTDSVTVK
SIDGTSQVITVTIVGTNDAPVVSGAVTGTATEGGASSTLNALANASDVDLGASLSVTNVP
GTLPAGVTYNAATHSFSFDPSNSAYDYLAAGATATVTVTYGVTDGTATVPASVSWTITGT
NDAAIITGTSTATITETDAALSASGKLNATDVDSSAAFVAQTDVAGDHGYGTFSIDAAGN
WTYAAGAHNEFVGGQTYTDSVTVKTADGTSQVITVTITGTNDAAVITGSTGATLTESDAA
LNASGKLDASDVDSSAAFVAQTNVAGDHGYGTFSIDADGNWTYAAGAHNEFAAGQAYTDS
ITVATADGTSQVITVTITGTNDAAVITGSSSADLTESDAALSASGKLDVTDVDSSAAFVA
QTNAAGDHGYGTFSIDADGNWTYAADAHNEFVAGQTYTDSVTVATADGTTQVITVTIYGT
NDAAVITGTASAEGDETDAALTLGGKLSATDVDSSADFQAGTLAGSHGSFTIAADGTWSY
TADSANDALNVGDSVTDSVVVKTIDGTEQTLSVTIHGTNDAAVITGTASAEGDETDAALT
LGGKLSATDVDSSADFQAGTLAGSHGSFTIAADGTWSYTADSANDVLNVGDSVTDSVVVK
TIDGTEQTLSVTIHGTNDAAVITGTASAEGNETDAAVTLGGKLSATDVDSSADFQAGTLA
GSHGSFTIAADGTWSYTADSANDVLNVGDSVTDSVVVKTIDGTEQTLSVTIHGTNDAAVI
TGTASAEGNETDAAVTLGGKLSATDVDSSADFQAGTLAGSHGSFTIAADGTWSYTADSAN
DALNVGDSVTDSVVVKTTDGTEQTLSVTIHGTNDAAVITGTASAEGDETDAAVTLGGKLS
ATDVDSSADFQAGTLAGAHGSFTIAADGTWSYTADSANDALNVGDSVTDSVVVKTIDGTE
QTLSVTIRGTNDAPVVAAALTAAANEDGAAFNLDLLGGASDVDNANLHVSDVTGLVAGVT
LSGDTLIVDPANAAFQSLQAGETREIVVNYNVIDGQGGSVAQSATITITGTNDGATISGD
TTGGTVVEDGVTQLTGHVSVADADHDQAAAIAASATGTYGSFSVDAAGNWSYQLDNASAA
VQSLANGQVVSEQSFTSESADHSASVTLNFSVQGTNDAPKVTLTQSATATEDGSPVSLNA
LAGTSDVDATDTLSVTYTSLPAGVTYDATTHQFTLDPTNAAFQHLAAGATDTVTVNYGVS
DGTTTTPSSLSFKVTGVNDAATITVDSAVTNDRAVTEAGVAAGDANASGKLLVTDVDDGQ
AAFQTPASLAGTYGTYTFNATTGSWTYTLDNTKAATQALTASQTVQDHLTVVSADGTATH
DIAVTVTGANDAATITVDATVANDRAVTEAGGLANATAGDASAAGKLLVTDPDSGQAAFQ
TPASLAGTYGTYTFNATTGSWTYTLDNTKAATQALTASQTVQDHLTVVSADGTASHDIAV
TVTGANDTATFGGTSTGSVTEDSTTLTSATGTLTVTDPDLNQASFVAQTNAAGTYGSLSI
NSAGAWTYTIDNTKSGFATLNTGTTAHDIFTVQSADGTTTTIDVSVVGNTDVTLAAVQTA
SGDPNDFDSQGAAGDIKFQGNGQSADTVYGGPGNDTINGNSGNDTLYGGSGDDKLDGGAD
NDTIYGGSGNDTITGGNNVDVLIGGWGADTLTGNQGNDTFKFLSALDRGDTITDFTHANG
EQDKIDVSSIDADQNTAGFQHFTFNGTTPTANGLWYVVNGSDVVLYGDIGGNTATIELHV
TLTGVTSLTAADFIL
NT seq
5988 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacgagcacgacaccgagcgtcaacaccacctcgatgttcaacacgccgcag
gcggttgacgatacctacactttctcgcagacctacctcgaagggctggccagcaacggc
atcgtcacgctgtcgctcgacgtcatggccaacgaccttggcggcgcggccaaggacctg
tgggcggtggtcgaccaggaagacactggccccgtcacctactccgccgcggaaaccgcc
gacctgatctcgaaggacgccaccggcgagtggaagaccacgcggcccggcaccaaggtg
gccgtggtcaacggcaagctgtcctaccagatggacgcgagcgcgatggcggtgatcaag
gcgctgcccgccggccagaccgtgaccgacgtgatctcgtactcgatccgccttgccaac
ggcacgctgagcgtcgccgaagtgacgatcaccattgccggcaccaacgatgccgcggtg
atcaccggaacctcggcggttaccatcaccgaaaccgattccgccctttcggccggcagc
aagctcaacgtcaccgacgtcgacaccggcgaggcgaagttccaggtccagagcaacgtc
gcgggcaaccacggctacggcacgttctcgatcgatgcgaacggcaactggacctacagc
gccggcgcccacaacgaattcgccgccgggcagagctacaccgacagcgtgacggtgaag
tccatcgacgggaccagccaggtcatcaccgtgaccatcgtgggcaccaatgatgcgccg
gtggtttcgggcgcggtgaccgggacggcgaccgaaggcggcgcgagctcgacgctcaat
gcccttgccaacgccagcgacgtcgacctcggcgcctcgctttcggtgaccaacgtgccc
ggcacgctgcccgcgggcgtgacctacaacgctgcgacgcacagcttctcgttcgatccg
tcgaacagcgcctatgactacctcgccgccggcgccacggcgaccgtgacggtgacctat
ggcgttaccgatggcaccgcgaccgtacccgcctcggtcagctggacgatcaccggcacc
aacgatgccgccatcatcaccggcacctcgaccgcgacgatcaccgaaaccgacgcggcg
ctcagcgccagcggcaagctgaatgcgaccgacgtcgacagctcggccgcgttcgtcgcg
cagaccgatgtcgccggtgaccacggctacggcacgttctcgatcgatgccgccggcaac
tggacctacgccgccggtgcgcacaacgaattcgtcggtggccagacctacaccgacagc
gtgacggtcaagaccgccgacggcaccagccaggtcatcaccgtgaccatcaccggcacc
aacgacgccgccgtcatcaccggcagcacgggcgcgacgctgaccgaaagcgacgcggcg
ctgaacgccagtggcaagctggacgcgagcgacgtcgacagctcggcggcattcgtggcg
cagaccaacgtggcgggtgaccacggctacggcacgttctcgatcgatgccgatggcaac
tggacctacgccgccggtgcgcacaacgaattcgccgccgggcaggcctacaccgatagc
atcacggtcgcgacggccgatggtaccagccaagtcatcacggtgacgatcaccggcacc
aatgacgcggcggtgatcaccggctcgtcgtccgccgacctcaccgaaagcgatgcggcg
ctcagcgccagcggcaagctcgacgtgaccgacgtcgacagctctgcggcgttcgtcgcg
cagaccaacgcggccggcgaccacggctacggcactttctcgatcgatgccgacggcaac
tggacgtatgccgcggacgcccacaacgaattcgttgccggccagacctataccgacagc
gtgacggtcgcgacggccgatggcacgacgcaggtcatcacggtaacgatctacggcacc
aacgacgcggccgtcatcaccggcacggcttcggccgaaggcgacgaaaccgacgccgcg
ctgacgctgggcggcaagctctcggcgaccgacgtcgacagctcggccgacttccaggcg
ggcacgctcgccgggtcgcacggctcgttcaccatcgccgccgatggtacgtggagctac
accgccgacagcgccaacgatgcgctgaacgtgggcgacagcgtgaccgacagcgtggtg
gtcaagaccatcgacggcaccgagcagacgctgagcgtgaccatccacggcaccaacgat
gccgccgtcatcaccggcacggcttcggccgaaggcgacgagaccgacgccgcgctgacg
ctgggcggcaagctctcggcgaccgacgtcgacagctcggccgacttccaggcgggcacg
ctcgccggatcgcacggctcgttcaccatcgccgccgacggcacgtggagctacaccgcc
gacagcgcgaacgatgtgctgaacgtgggcgacagcgtgaccgacagcgtcgtggtcaag
accatcgacggcaccgagcagacgctgagcgtgacgatccacggcaccaatgatgctgcc
gtgatcaccggcacggcatcggcggaaggcaatgaaaccgacgcggcggtgacgctgggc
ggcaagctctcggcgaccgacgtcgacagctcggccgatttccaggcgggcacgctcgcc
ggatcgcacggctcgttcaccatcgccgccgacggcacgtggagctacaccgccgacagc
gcgaacgatgtgctgaacgtgggcgacagcgtgaccgacagcgtcgtggtcaagaccatc
gacggcaccgagcagacgctgagcgtgacgatccacggcaccaatgatgctgccgtgatc
accggcacggcatcggcggaaggcaatgaaaccgacgcggcggtgacgctgggcggcaag
ctctcggcgaccgacgtcgacagctcggccgatttccaggcgggcacgctcgccgggtcg
cacggttcgttcaccatcgccgccgacggcacgtggagctacaccgccgacagcgccaac
gatgcgctgaacgtgggcgacagcgtgaccgacagcgtggtggtgaagaccaccgacggg
accgagcagacgctgagcgtgacgatccacggcaccaacgatgccgccgtgatcaccggc
acggcttcggccgaaggcgacgagaccgacgcggcggtgacgctgggcggcaagctctcg
gcgaccgacgtcgacagctcggccgacttccaggcgggcacgctggccggggcgcacggc
tcgttcaccatcgccgccgacggcacgtggagctacaccgccgacagcgcgaacgatgcg
ctgaacgtgggggacagcgtcaccgacagcgtggtggtgaagaccatcgacggcaccgag
cagacgctgagcgtgaccatccgcggcaccaacgacgcgccggtggttgctgctgcgctg
acggcggcggccaacgaggatggcgccgcgttcaacctcgacctgctgggcggggcgagc
gatgtcgacaacgcgaacctgcatgtttcggacgtgaccggcctggtcgcaggcgtgacg
ctgtcgggcgatacgctgatcgtcgatccggcgaatgcggcgttccagtcgctgcaggcg
ggcgagacgcgcgagatcgtggtcaactacaacgtcatcgacgggcagggtggcagcgtg
gcgcagagcgcgacgatcaccatcaccggcaccaacgacggcgcgacgatcagtggtgac
accaccggtggcaccgtggtcgaggatggggtgacccagctgaccggtcatgtgagcgtg
gccgatgccgaccacgaccaggcggcggcgatcgctgcgagcgcgaccggcacgtacggc
agcttctcggtcgatgcggcgggcaactggtcctaccagctcgacaatgcgagcgctgcg
gtccagagcctcgccaacgggcaggtggtcagcgagcagtcgttcaccagcgaatccgct
gaccactcggcatcggtgacgctgaacttctcggtccagggcaccaacgatgcgcccaag
gtgacgctgacccagtcggccaccgcgaccgaggacggttcgccggtttcgctcaacgcg
ctggcgggcacgtcggacgtcgatgcgaccgacacgctttcggtgacctacacctcgctg
ccggcaggcgtgacgtatgacgcgacgacgcaccagttcacgctggatccgaccaatgcg
gcgttccagcacctggccgccggggcgaccgacacggtcacggtgaactatggcgtgagc
gacggcaccaccacgacgccgagcagcctttcgttcaaggtgaccggcgtcaacgatgcc
gccacgatcaccgtggacagtgcggtgaccaacgaccgcgcggtgaccgaagcgggtgtg
gccgcaggcgatgcgaacgcttcgggcaagctgctggtgaccgacgtcgacgatggccag
gccgcgttccagaccccggcttcgctggcgggcacgtatggcacctatacgttcaatgcc
acgaccggcagctggacctacacgctcgacaacaccaaggcggcgacgcaggcgctgacc
gcgtcgcagacggtgcaggatcacctgacggtggtttcggccgacggcaccgcgacgcac
gacattgcggtcacggtaaccggcgccaacgatgccgccacgatcaccgtggatgcgacg
gtggcgaacgaccgtgcggtgacggaagcgggcggtcttgccaatgcgaccgcaggcgat
gcgagcgctgcgggcaagctgctggtgaccgatccggactctggccaggccgcgttccag
acgccggcttcgctggcgggcacctatggcacgtacacgttcaatgccacgaccggcagc
tggacctacacgctcgacaacaccaaggccgcgacgcaggcgctgaccgcgtcgcagacg
gtgcaggatcacctgacggtggtttcggccgacggcacggcatcgcacgacatcgcggtg
acggtgaccggcgccaacgacacggcgacgttcggtggcaccagcaccggttcggtcacc
gaggacagcaccacgctgaccagtgcgaccggcacgctgaccgtgaccgatccggacctg
aaccaggcgagcttcgtggcgcagaccaacgcggcgggcacgtacggttcgctctcgatc
aactcggccggtgcgtggacctataccatcgacaacaccaagtcgggcttcgccacgctc
aacaccggcacgaccgcacacgatatcttcaccgtgcagtcggccgatggcacgacgacg
acgatcgacgtgagcgtggtgggtaacaccgatgtgacgctggcggcggtgcagacggcg
agcggcgatccgaacgacttcgactcgcagggtgctgccggggacatcaagttccagggc
aacggtcagtcggccgatacggtctatggcggtccgggcaacgacaccatcaacggcaac
agcggcaacgacaccctgtacggtggttcgggtgacgacaagctggacggtggcgccgac
aacgacacgatctatggcgggtcgggcaacgacacgatcaccggcggtaacaatgtcgac
gtcctcatcggtggctggggagcggatacgctgaccggcaaccagggcaacgacacgttc
aagttcctgagcgctctcgaccgcggcgacacgatcaccgacttcacgcacgccaatggc
gagcaggacaagatcgacgtgtcctcgatcgacgcggaccagaacacggccggcttccag
cacttcaccttcaacggcacgacgccgaccgccaacggcctgtggtacgtggtgaacggc
agcgacgtggtgctttatggcgatatcggcggcaacaccgcgaccatcgagctgcatgtc
acgctgaccggggtgacctcgctgacggcggcagacttcattctctaa
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