Novosphingobium olei: NSDW_08710
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Entry
NSDW_08710 CDS
T09939
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nol
Novosphingobium olei
Pathway
nol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NSDW_08710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nol03021
]
NSDW_08710
03400 DNA repair and recombination proteins [BR:
nol03400
]
NSDW_08710
Enzymes [BR:
nol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NSDW_08710
Transcription machinery [BR:
nol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NSDW_08710
DNA repair and recombination proteins [BR:
nol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NSDW_08710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
IDH
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
BEU99776
LinkDB
All DBs
Position
911568..912632
Genome browser
AA seq
354 aa
AA seq
DB search
MTVNIKNWQELKKPNSLEIKSGNDAKSRATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
VTSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMQGEGPKRLQLSATGPGEVKAGDI
AVTGDIEVMNKDLVICHLDEGATFNMELTVDTGKGYVPAVSNRPVDAPIGLIPVDSLYSP
VRQVSYKVENARIGQELDYDRLNLTVETDGTVTPEDAVAYAARILQDQLSLFVHFDDQLP
TGHAPSVSGGVATHAPEESDANQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKT
EAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaacatcaagaactggcaggaactgaagaagcccaactccctcgagatcaag
tccggcaacgacgccaagagccgtgcgactttcgtcgccgagccgctggaacgtggcttc
ggtctgacgctcggcaacgcgctgcgtcgcgtgctgctgtcgtcgctccagggcgcggcc
gtcacctcgatcaagatcgagaacgtgctgcacgaattctcgtcgctggctggcgtgcgc
gaagacgtgacggacatcgtcctcaacgtgaagcagatcgcgctcaagatgcagggtgaa
ggccccaagcgtctgcagctctcggccaccggcccgggcgaagtgaaggcgggcgacatc
gccgtgaccggcgatatcgaggtcatgaacaaggacctcgtgatctgccatctcgacgaa
ggcgcgacgttcaacatggaactgaccgtcgacaccggcaagggctacgtccccgccgtg
tcgaaccgtccggtcgatgccccgattggcttgatcccggtcgactcgctctactcgccg
gtccgccaggtctcgtacaaggttgaaaacgcccgtatcggccaggagctcgattacgac
cgtctcaacctgacggtcgaaaccgacggcaccgtcacccctgaagacgccgtggcctat
gccgcgcgcatcctgcaggaccagctttcgctgttcgtccacttcgacgaccagctgccg
accggccacgcgccttcggtttcgggtggcgttgccacgcacgcgccggaagaaagcgac
gccaaccagctcaaccgctacctgctcaagaaggtggacgaactggaactgtcggtgcgt
tcggccaactgcctcaagaacgacaacatcatctacatcggcgatctggtccagaagacc
gaagccgagatgctgcgcacgccgaacttcggccgcaagtcgctcaacgagatcaaggaa
gtcctctcgtcgatgggcctgcgcctcggcatggacatccccggctggccgccggagaac
atcgaagagatggccaagaagctggagcaggagctgctcggttaa
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