Novosphingobium olei: NSDW_09410
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Entry
NSDW_09410 CDS
T09939
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
nol
Novosphingobium olei
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nol03400
]
NSDW_09410
Enzymes [BR:
nol01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
NSDW_09410
DNA repair and recombination proteins [BR:
nol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
NSDW_09410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Ig-like_POM152
Motif
Other DBs
NCBI-ProteinID:
BEU99846
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All DBs
Position
complement(1000481..1002055)
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AA seq
524 aa
AA seq
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MTTSNDKQGPVLVLILGDQLSPAISSLADRTPDDTVVLMAEVADETTYVRHHKAKIALVL
SAMRHFATELRQAGWTVDYVRLEDEGNSGSLTGEVARAIARHDARGVQVTEPGEYRLRQA
MEQWREDLPVRLRILADTRFVCPLPDFYEWAAARRELRMEYFYRDMRRKTGLLIKGDKPV
GGRWNFDAENRAGPEKGASFPSPPRFAPDATTRDVIAMVESRFARHFGTLDAFNWPVTRA
DAERLLAHFLKQRLPHFGRWQDAMVAGQDFVFHALLSPAINLGLLDPLAVCRAAEAEYHE
GRAPIEAVEGFIRQIIGWREYVRGMYWLDMPAMAEANFLDATRPLPDFWWTGEAKMRCLS
EAVRTTRDNAYAHHIQRLMVLGNFALLAGLKPQEVADWFLTVYADAYEWVELPNVAGMAL
HADGGRLASKPYAASGAYIDRMSDYCGTCAYKVKVKTGPDACPFNALYWHFLARNESKLA
RNPRLFQPYATWRRMTADKQREYIESAEAFLATLEPAEPGWARE
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaagcaacgacaagcagggcccggtcctcgtgctgatcctgggcgaccagctt
tcgcccgcgatttccagcctcgccgaccggacgcctgacgataccgtcgtgctcatggcc
gaagtcgccgacgagaccacctacgtgcgccatcacaaggccaagatcgcgctcgtcctc
tcggccatgcgccatttcgccaccgagctgcggcaggcgggctggacggtcgattacgtg
cggctggaagacgaaggcaattcgggcagcctcaccggcgaagtcgcgcgcgccatcgcc
cggcacgatgcccgcggcgtgcaggtgaccgagccgggcgaataccgcctgcggcaagcg
atggagcaatggcgcgaggacttgcccgtccgcctgcgcatcctggccgacacgcgcttc
gtctgcccgctgcccgatttctacgaatgggccgccgcgcggcgcgaactgcgcatggag
tatttttaccgcgacatgcgccgcaagaccggcctgctgataaaaggcgacaagcccgtc
ggcggccgctggaacttcgacgccgaaaaccgcgccgggccggaaaagggcgccagcttc
cccagcccgccacgcttcgcccccgatgccacgacgcgcgacgtgatcgccatggtggaa
agccgcttcgcccgccacttcggcactctggatgcattcaactggccggtaacgcgggcg
gacgccgaacggctcctcgcccacttcctgaaacagcgcctgccccacttcggtcgctgg
caggatgcgatggtcgcggggcaggacttcgtgttccacgccctgctttcgcccgcgatc
aacctcggcctgctcgatccgctcgccgtgtgccgggccgccgaggccgagtaccacgaa
ggccgcgcgcccatcgaggcggtcgagggcttcatccgccagatcatcggctggcgcgaa
tacgtgcgcggcatgtactggctcgacatgcccgccatggccgaggccaatttcctcgat
gccacccgcccgctgcccgacttctggtggacgggcgaggcgaagatgcgctgcctgtcg
gaagccgtgcgcaccacgcgcgacaatgcctatgcccatcacatccagcggttgatggtg
ctgggcaacttcgcgctgctggcggggctcaagccgcaagaggtggccgactggttcctc
accgtctatgccgatgcctacgaatgggtcgaactgcccaacgtcgccggcatggcgctc
cacgccgacggcggccgcctcgcctccaagccctatgccgcgagcggcgcctacatcgac
cggatgagcgactattgcggcacctgcgcctacaaggtgaaggtcaagaccggcccggac
gcctgccccttcaacgcgctctactggcacttcctcgcccgcaacgagagcaagctcgcc
cgcaacccccgcctgttccagccctacgccacctggcgccgcatgaccgcggacaagcag
cgcgaatatatcgagagcgccgaggcgtttctggcgacgctggaaccggcggaaccgggc
tgggcgcgggagtag
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