Novosphingobium olei: NSDW_09430
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Entry
NSDW_09430 CDS
T09939
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
nol
Novosphingobium olei
Pathway
nol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NSDW_09430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nol03400
]
NSDW_09430
Enzymes [BR:
nol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NSDW_09430
DNA repair and recombination proteins [BR:
nol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NSDW_09430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
AAA_19
AAA_22
Fe-ADH
Zn_ribbon_6
Bac_DnaA
HTH_17
HTH_5
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
BEU99848
LinkDB
All DBs
Position
complement(1003113..1005278)
Genome browser
AA seq
721 aa
AA seq
DB search
MNRVRCLVFNAALGPLDYRVPEGMTVEPGSVVVAPLGPRQIVGVVWEAERLPASEVPDAK
LRPLLQVLPVPPLAAPLRRLIEWCADYYVTSLASVARMALSSSAALRGGGTITEYRLTGH
EPARLTPQRAQALDLLNGQQGTIRELAEIAGVSDAVLRGMVNAGILEAVLVDSDRPYPAP
DPRHAEPDLSAEQAEAAAKMVAAVEAHEFRPFLLDGVTGSGKTETYSEAIAAAIAAGRQV
LVLLPEIALTESFLKRFEARFGVPPVTWHSSLKSSERRRAWRQVAFGQARVVVGARSALF
LPFARLGLIVVDEAHEISFKQDDGVRYNARDVAVMRAHFESVPVVLASATPALESLQMAE
AGRYERLVLPSRFGGATLPDIRVVDLREQQPPRGQWLAPVLVDALRDRLLKGEQSLLFLN
RRGYAPLTLCRTCGHRFQCPNCSAWLVEHRLSRRLACHHCGYEVPPPDACPECGEKDCLV
ACGPGVERIADEVAAILPQARVALVTSDTLTSPAKAAEFVAQAEAKAIDVIVGTQLVTKG
FHFPELTLVGVVDADMGLEGGDLRAAERTYQQVAQVAGRAGRGEKPGEVLIQTRHPEAPV
IEALASGDRDAFYAAETEARREANAPPFGRWAAIIVSSEDEAEARDAARAIGGTAPRLKD
VLVLGPAPAPLSLLRGRYRYRLLINARRSTELQRVIREWLDPLRFAPGVRVAVDVDPYSF
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcgtccgctgccttgtcttcaacgccgccctcgggccgctggactatcgcgtg
cccgaaggcatgacggtggagccgggcagcgtggtcgttgcgccgctggggccgcgccag
atcgtgggcgttgtctgggaggccgaacggctgcccgccagcgaggttccggatgcgaag
ctgcgcccgctgctgcaggtcctgccggtgccgccgctggccgccccgctgcgccggctg
atcgaatggtgcgcagattactacgtcacaagcctcgcctcggtcgcgcggatggcgctg
tctagcagtgcggcgctgcgcggcggcggaacgatcaccgaataccgcctgaccgggcac
gaaccggcgcgccttaccccgcagcgcgcgcaggcgctcgatcttctgaacggacagcag
ggcaccatccgcgaactggccgagatcgcgggcgtgtccgacgcggtactgcgcggcatg
gtcaatgccggcatcctcgaagccgtgctggtcgatagtgaccgcccctatcccgcgccc
gatccgcgccatgccgagcccgatctttcggccgagcaggccgaagccgccgccaagatg
gtcgccgcggtcgaggcgcacgaattccgcccgttcctgctcgacggggtgaccggttcg
ggcaagaccgaaacctacagcgaagccatcgctgccgccatcgcagctgggcggcaggtg
cttgtcctgctgcccgaaatcgcgctgaccgaaagcttccttaaacggttcgaggcgcgc
ttcggcgtgccgccggtcacctggcattcctcgctcaaatcgtccgagcgccgccgcgcc
tggcggcaggtcgccttcgggcaggcccgcgtcgtggtcggcgcgcgctcggcgctgttc
ctgccgtttgcccggctgggcctgatcgtggtcgacgaagcgcacgagatcagcttcaag
caggacgatggcgtgcgttacaacgcgcgcgacgtggcggtgatgcgcgcccatttcgaa
agcgtgccggttgtgctggccagcgccacgcccgcgctcgaaagcctgcagatggccgag
gccgggcgctacgaacggctcgtcctgccgagccgtttcggcggcgcgaccctgcccgac
atccgcgtggtcgatctgcgcgagcagcagccgccccggggccagtggctcgcccccgtg
ctggtcgatgcgctgagggaccggctgctcaagggcgaacagagcctgctgttcctcaac
cgtcgcggctatgcgccgctcacgctatgccgcacctgcggccatcgcttccagtgtccc
aactgctcggcctggctggtcgaacaccgcctttcgcgccgccttgcctgccaccactgc
ggctacgaagtgcccccgcccgacgcctgccccgaatgcggcgagaaggactgcctcgtc
gcctgcggccccggcgtggaacgcattgccgatgaagtcgccgcgatcctgccgcaggcg
cgcgtcgcgctggtcacctcggacacgctgaccagccccgccaaggccgccgaattcgtg
gcgcaggccgaagcgaaggcaatcgacgtgatcgtcggcacgcagctcgtcaccaagggc
ttccactttcccgagcttaccctggtcggcgtggtcgatgccgacatggggctggaaggc
ggcgatctgcgcgcggccgagcgcacctaccagcaggtcgcccaagtcgccgggcgcgcc
gggcgcggtgaaaagccgggcgaagtgctgatccagacccgccatcccgaagccccggtg
atcgaggcgctggcgagcggcgaccgcgacgcgttctacgccgccgagaccgaagcccgg
cgcgaggcaaacgccccgccgttcgggcgctgggccgcgatcatcgtctcatccgaggac
gaggccgaggcccgcgatgccgcccgcgccatcggtggcaccgcgccgcgcctgaaggac
gtgctggtgctgggccccgcgcccgcgccgctttcgctgctgcgcggacgctatcgctat
cgcctgctgatcaacgcccgccgctcgaccgagttgcagcgcgtgatccgcgaatggctc
gatcccttgcgctttgcccccggtgtcagggttgcggtggacgtcgatccctatagcttc
gtgtga
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