Novosphingobium olei: NSDW_09840
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Entry
NSDW_09840 CDS
T09939
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
nol
Novosphingobium olei
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nol01011
]
NSDW_09840
Enzymes [BR:
nol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NSDW_09840
Peptidoglycan biosynthesis and degradation proteins [BR:
nol01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NSDW_09840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
BEU99889
LinkDB
All DBs
Position
complement(1042011..1044023)
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AA seq
670 aa
AA seq
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MDVKAVIRKLLLGAAVLPGLAASVACHASEGSGDVDASAWDRARAQLVAQAQGPMAQAIE
RWKLLTSSNRFSFNDYAGFVLSYPRFPEEERLRRYAEAALDREFADATTLVAFFDRQPPL
TNPGRAQYALALRQLGRPDAAQVARAAWRGGAMSDMAEANILAAYGSTFTQDDHDARMDA
LLWAGATAQAQRELPWISPARKAIDGARLASLQGLDPYAVAAGVQPQALNSDPGFLFQRA
RQLRKSGQGSAAQSLLANRLPLTRKPLDREKWVEELLMNARGAATSGDARSAVRIAAAID
DAFDPGEDVSQTTYGLRDDYTSLEWLGGTQALWNMGDGNQAAPLFYRYGAAARTPGTRSK
GFYWAGRALTQAGRTADANKYYELAAQYADQFYGLLALERLGRAVPRFARDSDAQATAAE
RAAFAAAPLTQAVREVAREADWRTSVRFFKEIAEQQQTEGQHMLVAELARSLGRRDLGVI
VGQAAGARGYLDFQHIAFPLVTVPPGYESGWTGIHAIARQESQFAQNALSHAGARGLMQL
MPGTANEQAGKLGLAYDTTLLTQDPNLNIQLGSAYFQRMLNYFGGSWPLAVAAYNAGAGN
VNKWLRANGDPRTGGIAWVDWIERIPLSETRNYVQRVLENAVVYEAMNPDKASYRGPNPL
SHFLGKNQPG
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtggacgtgaaagctgtcattcgaaagctgctgctgggtgcggcagtcctgccgggcctt
gccgcctcggtcgcctgccacgccagcgaaggcagcggcgatgtcgatgcaagcgcgtgg
gatcgcgcccgcgcgcaactcgtcgcgcaggcgcaggggccgatggcccaggcaatcgag
cgctggaagctgctgaccagctccaaccgcttctcgttcaacgattatgccggcttcgtg
ctgtcctatccgcgctttccggaagaggagcgcctgcgccgctatgccgaagcggcgctc
gatcgcgaattcgccgatgccaccacgctcgtcgccttcttcgatcgccagccgccgctg
accaatcccggccgcgcgcagtacgcgctcgcgttgcgccagctcggccgccccgatgcc
gcgcaagtcgcccgtgccgcctggcgcggcggcgcgatgagcgacatggccgaagcgaac
atcctcgccgcctatggatcgaccttcacgcaggacgatcacgacgcgcggatggacgcg
ctgctctgggccggcgccaccgcgcaggcgcagcgcgaactgccgtggatctccccggcg
cgaaaggccatcgacggcgcgcgcctcgcttcgctgcaggggctcgatccctatgccgtt
gccgcaggcgtccagccgcaggcgctcaattccgatcccggattcctcttccagcgcgcg
cgccagcttcgcaagtcgggccagggcagcgccgcgcaatcgctgctcgcaaaccgcctg
ccgctcacgcgcaagccgctcgaccgcgaaaagtgggtcgaggaactgctcatgaacgcg
cgcggcgcggccacgtcgggcgatgcccgttctgccgtgcgcatcgcggcggccatcgac
gatgcgttcgatccgggcgaggatgtcagccagacgacttacggcctgcgcgatgattac
acctcgctcgaatggctcggcggcacgcaggcgctgtggaacatgggcgatggcaaccag
gccgccccgctgttctaccgctacggtgctgccgcgcgcacgccgggcacccggtccaag
gggttctactgggcgggccgcgcgctcacccaggcgggccgcacggcagacgccaacaag
tactacgaactcgccgcgcaatatgccgaccagttctacggcctcctcgcgctcgaacgg
ctcggccgcgcggtgccgcgctttgcccgcgattccgatgcgcaggccacggccgccgaa
cgcgccgccttcgccgccgcaccgctgacgcaggccgtgcgcgaagtggcgcgcgaagcc
gactggcgcaccagcgtgcgcttcttcaaggaaatcgccgaacagcagcagaccgaaggc
cagcacatgctcgtcgccgaactggcgcgcagcctcggccggcgcgacctgggcgtgatc
gtggggcaagcggccggcgcgcgcggctatctcgatttccagcatatcgccttcccgctc
gtcaccgtgccgccgggctacgaaagcggctggaccggcatccacgccatcgcccgtcag
gaaagccagttcgcccagaacgcgctgagccatgccggcgcgcgcgggctgatgcagctg
atgcccggcaccgccaacgaacaggcgggcaagctcggcctcgcctacgataccacgctg
ctgacgcaggaccccaacctcaacatccagctcggcagcgcctatttccagcgcatgctc
aattacttcggcgggtcttggccgctggcggtcgccgcctacaacgcgggcgcgggcaac
gtgaacaagtggctgcgcgccaacggcgatccgcgcaccggcggcatcgcctgggtcgac
tggatcgaacgcatcccgctgtcggaaacccgcaactacgtccagcgcgtgctggaaaac
gccgtggtctacgaagccatgaaccccgacaaggccagctaccgcggccccaacccgctc
agccacttcctcggcaagaaccagccaggctga
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