Novosphingobium olei: NSDW_10470
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Entry
NSDW_10470 CDS
T09939
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nol
Novosphingobium olei
Pathway
nol03420
Nucleotide excision repair
nol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NSDW_10470
03430 Mismatch repair
NSDW_10470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nol03400
]
NSDW_10470
Enzymes [BR:
nol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NSDW_10470
DNA repair and recombination proteins [BR:
nol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NSDW_10470
MMR (mismatch excision repair)
Other MMR factors
NSDW_10470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
AAA_22
AAA_11
DUF3553
DUF2067
Motif
Other DBs
NCBI-ProteinID:
BEU99952
LinkDB
All DBs
Position
complement(1111621..1113882)
Genome browser
AA seq
753 aa
AA seq
DB search
MPAWLDGLNPPQREAVVTTEGPVLMLAGAGTGKTAALTARLANLLRQRLAWPSEILCVTF
TNKAAREMRERVGQLIGPSVEGMPWLGTFHSVAAKMLRRHAELVGLQSNFTIIDTDDQIR
LLKQLIVAEGLDEKRWPARQLAGLIDKWKNRGLNPADLDAGENEAYANGKGQRFYALYQN
RLKDLNACDFGDLLLHMLNIFRRERDILEMYQQRFKYVMVDEYQDTNAVQYLWLRLLAQT
RKNICVVGDDDQSIYSWRGAEVANILRFEKDFPGAKVIKLEQNYRSTPHILGAASGLIAE
NAERLGKTLWTERNGGDKVRVIGIWDGPEEARRIGEEIERLEREGCSLDAVAILVRAQFQ
TREIEDRFIQIGMAYRIVGGFRFYERAEIRDALAYLRLIASPSDDLAFERIYNTPKRGLG
DKTLEKIHRFARAQGMPLLRAALEICDTDELPTRARNTLLALVRDFARWRDAAGTLVPAE
LARTMLDESGYTAALQAEKSAEANGRLENLSELARAMEEYDTLGDFLEHVSLVMDNDRSE
DEEKVTVMTIHAAKGLEFDQVFLPGWEEGVFPSQRALDEGGLASLEEERRLAYVAITRAK
KRCTILHAANRRIYGQWTSSIPSRFIGELPGDHIEEETTLSGGASLWRAQWSEHSDPFAD
VARNQPSRIVTRGPGWQRAAAQTYDPTPKRIAEPGRSAASFASKPRADIALGARVFHDKF
GYGTVAAQEGNKLEIDFETAGRKRVIDSFIKPA
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcatggctcgatggcctgaacccgccgcagcgcgaggcggtggtcaccaccgaa
gggccggtgctgatgctggcgggtgccggcacgggcaagactgcggcgctgaccgcgcgg
ctggccaacctgctgcgtcagcggctggcctggcccagcgagatcctgtgcgtcaccttc
accaacaaggccgcgcgggaaatgcgcgagcgagtgggccagctgatcggaccatcggtg
gaaggcatgccgtggctgggcacgttccattcggtcgccgccaagatgctgcgccgccat
gccgaactggtcgggctgcaatcgaacttcacgatcatcgacaccgacgaccagatccgc
ctgctcaagcagctgatcgtggccgaggggctggacgaaaagcgctggcccgcgcgccag
ctcgccgggctgatcgacaagtggaagaaccgcgggcttaacccggcggacctcgatgcg
ggcgaaaacgaagcctatgccaatggcaaggggcagcgcttctatgcgctctaccagaac
cggctgaaggatctgaacgcctgcgatttcggcgatctgctgctccacatgctcaacatc
ttccggcgcgagcgcgacatcctcgagatgtaccagcagcgcttcaagtacgtgatggtg
gacgaataccaggacaccaacgcggtccagtacctgtggctgcggctgctggcgcagacg
cgcaagaacatctgcgtggtgggggacgacgaccaatcgatctattcctggcgcggcgcg
gaagtcgccaacatcctgcgcttcgaaaaggactttcctggcgccaaggtcatcaagctc
gaacagaactaccgctccaccccacacatcctgggcgcggcgtcgggcctgatcgcggaa
aacgccgaacggctcggcaagacactgtggaccgaacgcaatggcggcgacaaggttcgc
gtcatcggcatctgggacgggccggaagaagcgcgccgcatcggcgaggagatcgagcgg
ctggaacgcgaggggtgcagcctcgatgccgtggccatcctcgtgcgcgcacagttccag
acgcgcgagatcgaggatcgcttcatccagatcggcatggcctatcgcatcgtcggcggc
ttccgcttctatgaacgtgcggaaatccgcgatgcgctcgcctacctgcggctgatcgcc
agtccttcggacgacctcgcgttcgaacggatctacaacacccccaagcgtggccttggc
gacaagacgctggagaagatccaccgctttgcccgcgcgcagggcatgccgttgctgcgc
gccgcgctcgagatctgcgataccgacgaactcccgacgcgggcgcgcaacacgctgctg
gcgctggtgcgcgacttcgcccgctggcgcgatgcggcgggcacgctggtgccggcggaa
cttgcgcgcacgatgctggatgaaagcggctacaccgccgcgcttcaggccgaaaagagc
gccgaggcgaatggtcggctcgaaaacctgtccgaacttgcccgcgcgatggaagagtac
gacacgcttggcgactttctcgaacacgtcagcctggtgatggacaacgaccggagcgag
gacgaggagaaggtcaccgtgatgaccatccacgccgccaaaggtctggaattcgaccag
gtgttcctgcccggctgggaggaaggcgtgttccccagtcagcgcgcgctcgacgaaggc
ggactcgccagcctggaggaagaacgccgcctcgcctacgtggcgatcacccgggcaaag
aagcgctgcaccatcctgcacgccgccaaccggcggatctatggccagtggaccagctcg
atccccagccgcttcatcggcgaactgcctggcgaccatatcgaggaggaaaccacgctg
tcgggcggcgcgtcgctgtggcgggcacagtggtccgaacattccgatcccttcgccgac
gtggcgcgcaaccagccgtcgcgcatcgtaacgcgggggcccggctggcagcgcgctgcg
gctcagacctatgaccccacgccgaagcgcatcgccgaacccgggcgcagcgcggcaagc
ttcgcctcgaagccgcgcgccgacatcgcgctgggcgcccgcgtgttccacgacaagttc
ggatacggcaccgtcgccgcgcaggaaggcaacaagctggagatcgatttcgagacggcc
ggacgcaagcgggtgatcgacagcttcatcaagccggcgtga
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