Novosphingobium olei: NSDW_13420
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Entry
NSDW_13420 CDS
T09939
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nol
Novosphingobium olei
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nol03016
]
NSDW_13420 (truB)
Enzymes [BR:
nol01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NSDW_13420 (truB)
Transfer RNA biogenesis [BR:
nol03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NSDW_13420 (truB)
Prokaryotic type
NSDW_13420 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BEV00248
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All DBs
Position
1418411..1419325
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AA seq
304 aa
AA seq
DB search
MVDGWIILDKPLELGSTQGVAAVKRNLRQAGHGKVKVGHGGTLDPLATGVLPIAVGEATK
LCGRMLDATKEYAFTIEFGRETDTLDLEGKVIAESDARPTLDALTAALVRFQGPIEQVPP
AYSALMIDGQRAYDRARAGEDVAMPTRTVTIGALTLETQEGPDHSVESATLVAYVSKGTY
IRSLARDIAHALGTVGHVTMLRRLRAGPFGLSEAISLDKLNEVGKGAPLEHILLPLEAGL
VDIPALDLDPEQARAVRQGRVLTGLPCNDGLFWARLGRVPVALVELSGGSLTVARGFNLP
DVAE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggttgatggctggatcattctcgacaagccgctcgagcttggctcgacgcaaggcgtg
gctgcggtgaagcgcaacctgcggcaggcggggcatggcaaggtgaaggttggccacggc
ggcacgctcgatccgctggcgaccggcgttctgccgatcgcggtgggggaggcgaccaag
ctgtgcgggcgaatgctggatgcgaccaaggagtacgcgttcacgatcgagttcgggcgg
gaaaccgacacgctcgaccttgaaggaaaggtcatcgcggaaagcgatgcgcggcctacg
ctggatgccctgacggctgctctcgttcgcttccaaggccccatcgagcaggtccccccg
gcctattcggcgctgatgatcgacgggcagcgggcctatgatcgcgcgcgtgccggcgaa
gacgtcgcaatgccaacgcgcacggtgacgatcggtgcgctgacgctggaaacgcaagaa
ggacccgatcactccgtcgaatccgcaacgctcgtcgcttatgtttcgaagggcacctat
atccgcagcctggcacgcgacatcgcgcatgcgctgggcacggtaggccacgtcacgatg
ctgcgccgcctgcgggccgggccgttcggcttgtcagaggcgatttcgctggacaaactg
aacgaggtcggtaaaggcgcgccccttgaacacatactcttgccgctggaggcagggctg
gtcgacatcccggctctagacctcgatcccgagcaggcaagggcggtccgacagggccgc
gttctgacgggattgccctgcaacgacgggctcttctgggcaagactgggcagggtgccc
gtcgcgctggttgagctttcgggcggaagcctgacggttgccagggggttcaacctaccc
gatgtcgcggagtga
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