Novosphingobium olei: NSDW_14470
Help
Entry
NSDW_14470 CDS
T09939
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nol
Novosphingobium olei
Pathway
nol03030
DNA replication
nol03430
Mismatch repair
nol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NSDW_14470 (dnaE)
03430 Mismatch repair
NSDW_14470 (dnaE)
03440 Homologous recombination
NSDW_14470 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nol03032
]
NSDW_14470 (dnaE)
03400 DNA repair and recombination proteins [BR:
nol03400
]
NSDW_14470 (dnaE)
Enzymes [BR:
nol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NSDW_14470 (dnaE)
DNA replication proteins [BR:
nol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NSDW_14470 (dnaE)
DNA repair and recombination proteins [BR:
nol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NSDW_14470 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
DUF655
COE1_HLH
T2SSK
Motif
Other DBs
NCBI-ProteinID:
BEV00353
LinkDB
All DBs
Position
1525014..1528607
Genome browser
AA seq
1197 aa
AA seq
DB search
MPYAPFVPLRVFSSYTMLDGAVDPKIIAKTAAERGFPAIAITDRNGLYGSAAFAKACKDV
GVQPVIGVMLAVARPEREGAATGFGPAAPTIDWLGLYAQDSKGYDNLCHLVSRAHLDRPL
EFAPHVVLADLVGHTDSLICLTGGGEGALTRLFAGGQKAAAEAYCDRLQELFGDRLYIEL
TRTGDPVESGGEDGLFDLAYARDIPLVATNPACFAEAGFYAAHDAMLCIASSTHVDSADR
PRSSQEWWIKPVEMMEQLFADCPEALANSLVVAQRTACTPPKRKPILPSLAGDKEGEAKA
CAADSRTGLVTRLKPYYPEAAHAELAALLTLGPDAEPDHADYPQLLVAGVLEEVLGYRER
LEFEISIINRMGFGGYFLIVADFIKWAKENGIPVGPGRGSGAGSLVAWALTITDLDPIKL
GLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQRKYGDDHVAQIITFGKLKARAVLRD
TGRILQMSYGQVDRLCKMVPNHPTDPWPLPRALNGVLELKREYDRDPEVKRLIDLAMQLE
GLPRNSSTHAAGVVIGDRPLAQLVPLYRDPRSDMPVTQFDMKFVEDAGLVKFDFLGLKTL
SVLRKAVDLMAKRGIEIDLSTLAWDDVDTYKLLQSGDTVGVFQLESEGMRRTLAAVKPTN
FGDIIALVSLYRPGPMDNIPLFGRRKNGLESIEYPHEKLAGILSETYGIFVYQEQVMQAA
QILAGYSLGDADLLRRAMGKKVQAEMDAQRQRFVDGCKTVSDIPAAKANELFDLIDKFAG
YGFNKSHAAAYALLAYQTAWLKTHYPHEFYAASMCFDMHQSEKLAVFVDDMRRNGVSLAG
PDINHSEAEFTVERTDDGFAVRYALAGLRNVGEKAMEAIVAEREANGEFVSLDDLFKRVP
AGSMNRRQLEALAAGGALDCLEPNRAKLIANAELLMAVADEAARSRTSGQGGLFGGDDHA
APATRLAETKPWSRAEQMAAERENFGFYFAAHPVEEYRAVASANGARSYGSLMTGGGEGG
GSRSGAVMAALVENVQKRKTKKGKDFVMADFSDSSGLFSASCFEEALVDDFVTWAREGTC
VLLNVELDRPNPDEPPRVTVRNARPLSSVTSAARMMLKLDVTTPEAMAELALLLPRGNDA
KGEVVARLKTGRGREPLVRLGTDFRLDSDLIERLIPIEGLANVALTARPERHLRLVE
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgccttacgctcccttcgtgccgctgcgcgtgttttcgtcctacaccatgctcgatggc
gcggtcgacccgaagatcattgccaagacggcggcggagcgcgggtttccggcgatcgcg
atcactgaccgcaacgggctttatggcagcgcggcctttgccaaggcgtgcaaggacgtg
ggggtgcagccggtcatcggcgtcatgctcgccgtcgcgcggccggagcgcgaaggtgcg
gcgacgggtttcggaccggcagcgcctacgatcgactggctggggctctatgcgcaggat
tcgaaggggtacgacaacctctgccacctcgtcagccgggcgcacctcgaccgccccctc
gaattcgcgccgcatgtcgtgctggccgatctggttggccataccgacagcctgatctgc
ctgacgggtggcggcgaaggggcgctgacgcgactgttcgctggtggtcagaaggcggcg
gccgaggcatattgcgaccggctgcaggagttgtttggcgaccgcctttacattgaactc
acccgcacgggcgatccggtcgaaagcgggggcgaggacgggttgttcgacctcgcctat
gcgcgcgatattccgctcgtcgcgacaaatccggcctgctttgccgaagccgggttctat
gccgcgcacgatgccatgctgtgcatcgccagttccacccatgtcgacagtgcggaccgg
ccgcgttcctcgcaggagtggtggatcaagcccgtcgagatgatggaacagctcttcgcg
gattgtcccgaagcgctggccaattcgctggtcgtggcgcagcgaacggcttgcacgccg
cccaagcgcaagccgatcctgccaagccttgccggtgacaaagagggcgaggccaaggcc
tgcgccgccgacagccggaccggtctcgtcacgcggctgaagccctattaccccgaagcc
gcgcacgccgaactggcggcgctgctgacgctggggcccgacgccgagcccgaccatgcc
gactacccgcaattgctggtcgcgggcgtgctcgaagaagtgcttggatatcgagagcgg
ctcgagttcgagatctcgatcatcaaccgcatgggctttggcggctacttcctgatcgtg
gccgacttcatcaagtgggccaaggagaacggcattccggtcggacccggccgtggttcg
ggcgcggggtcgctcgttgcgtgggcgctgacgatcaccgatctcgatcccatcaagctc
gggctgctgttcgaacgctttctcaatccggaacgcgtgtcgatgcccgacttcgatatc
gacttctgcgaaacccggcgcggcgaggtgatccgctacgtccagcgcaagtacggcgac
gatcacgttgcgcagatcatcaccttcggcaagctgaaggcgcgcgcggtgctgcgcgat
accgggcgcatcctgcagatgagctatggccaggtcgaccggctgtgcaagatggtgccc
aaccatccgaccgacccctggccgctgccgcgcgcgctcaacggcgtgctggaattgaag
cgcgaatacgaccgtgatcccgaggtcaagcgactgatagacctggcgatgcagctcgaa
ggcctgccgcgcaacagttctacgcacgcggcgggcgtggtgatcggcgaccggccgctg
gcgcagctggtgccgctctaccgcgatccgcgttcggacatgcccgtgacgcagttcgac
atgaagttcgtcgaggatgcggggctggtgaagttcgacttcctcggcctgaagacgttg
tcggtgctgcgcaaggcggtcgacctgatggcgaagcgcgggatcgagatcgatctgtcg
acactcgcctgggacgatgtcgatacctacaagctgctgcagtctggcgacacggttggc
gtgttccagctggaatccgaaggcatgcggcgcacgctggcggcggtgaagccgaccaac
ttcggtgacatcattgcgctggtctcgctctaccgcccggggccgatggacaacattccg
ctgttcgggcggcgcaagaacgggctcgagagcatcgagtacccgcacgagaagctcgcc
gggatcctgtccgagacctacggcatcttcgtctaccaggaacaggtcatgcaggccgcg
cagatcctcgcgggctattcgctgggcgatgccgatcttctgcgccgcgccatgggcaag
aaggtccaggcagagatggacgcgcagcgccagcgcttcgtcgacgggtgcaagacggtg
tccgacatcccggcggcgaaggccaacgagctgttcgacttgatcgacaagttcgcaggc
tacggcttcaacaagagccacgccgccgcctacgcgctgctcgcctaccagacggcgtgg
ctcaagacgcattacccgcacgaattctacgcggcctcgatgtgcttcgacatgcaccag
tcggaaaagcttgcggtgtttgtggatgacatgcggcgcaacggcgtgtcgctcgccggg
ccggacatcaaccattccgaagcggagtttaccgtcgagcggacggacgacggctttgcc
gtgcgctatgcgctggcaggcctgcgcaacgtgggcgagaaggcgatggaagcgatcgtc
gccgagcgcgaagcgaacggggagttcgtgagcctggacgacctgttcaagcgggttccg
gcaggatcgatgaaccggcggcagctggaagcgctggccgcgggcggggcgctggattgt
ctcgagcccaaccgcgccaagctgatcgccaatgccgaactgctgatggcggtggccgac
gaggcggcccggtcgcgcacgtcgggccagggcggcctgttcggtggtgatgaccatgca
gcgccggcaacgcggctcgccgagacgaagccatggagccgggccgagcagatggcggcc
gagcgcgagaacttcggcttctatttcgcggcgcatccggtcgaggaatatcgcgcggtg
gcgtcggccaatggcgcgcgatcgtacggaagcctgatgaccggcggcggcgagggcggc
ggcagccggtcgggtgcggtgatggcggcgctggtggagaatgtgcagaagcgcaagacg
aagaagggcaaggacttcgtcatggcggacttctccgattcgtcgggactgttctccgca
tcgtgcttcgaggaggctctggttgacgatttcgtgacctgggcgcgcgagggcacttgc
gtgcttctgaatgtcgaactcgaccggccgaaccccgatgagccgccgcgcgtcactgtt
cgcaacgcgcggccgctgtcctctgtgaccagcgcggcgcgcatgatgctgaagctggac
gttacgacacccgaggcgatggcggagctcgccctgctgctgccgcgtgggaacgatgcc
aagggcgaggtggtggcgcggctcaagacgggcagggggcgtgaacccttggtccggctc
ggcaccgacttccgcctcgacagcgacttgattgaacgattgattcccatcgaggggctt
gccaatgtggcgctgaccgcaagaccggaacggcatctgcggctcgtcgaatag
DBGET
integrated database retrieval system
