KEGG   Novosphingobium olei: NSDW_16240
Entry
NSDW_16240        CDS       T09939                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
nol  Novosphingobium olei
Pathway
nol02020  Two-component system
Brite
KEGG Orthology (KO) [BR:nol00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NSDW_16240
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:nol02022]
    NSDW_16240
Two-component system [BR:nol02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   NSDW_16240
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 Mg_chelatase AAA_16 AAA_22 MCM VpsR FleQ OKR_DC_1_N AAA_30
Other DBs
NCBI-ProteinID: BEV00530
LinkDB
Position
complement(1732624..1734012)
AA seq 462 aa
MALDILIVDDERDIRELVAGVLSDEGYGCRTAADSTAALAAIDERRPSLVLLDVWLHGSP
MDGLEVLDEIKKREPELPVLIFSGHGNIDTAVSAISRGAMDFIEKPFEAERLLLLVERAT
ETERLRRENQRLREGFAIADEFTGNSASINAVRATLKRVANTGSRLLITGPAGAGKEVAA
RLLHSWSPRAQSAFVTVSAARITPERFEQELFGEEADGKLVRAGLLEMADGGTLFLDEVA
DMPASSQARILRVLTDQAFVRVGGNRQIRVDVRVVSSTSRPLEKEIAERRFREDLYYRLN
VVPVTIPPLNERRDDIPSLIDHFFTRYASEQGIAPPVVSAEAMAALQAYDWPGNVRQLRN
VVERTIILAPRDRLERIEADMLPSEIVSTRFGGGNTSSALMGVPLREARENFEREYLKVQ
IRRFSGNISKTASFIGMERSALHRKLKLLGMAERREDEDDDE
NT seq 1389 nt   +upstreamnt  +downstreamnt
atggcactcgatatcctcatcgtcgatgacgagcgcgatattcgcgaactggtcgctggc
gtgctgagcgacgaaggctatggctgtcgcacggcggcggacagcaccgcggcgctggcc
gcgatcgacgagcgccgacccagcctggtgctgctcgacgtgtggctgcacggtagcccg
atggacggactggaagtgctcgacgagatcaagaagcgcgagcccgagcttcccgtcctg
atcttctcgggccacggcaacatcgacacggcggtttctgcgatcagccgtggcgccatg
gacttcatcgagaagccgttcgaggccgaacgcctcctgctgctggtcgaaagggccacc
gaaaccgagcgactgcggcgcgaaaaccagcgcctgcgcgaaggctttgccatcgccgac
gaattcaccggcaatagtgcgtcgatcaacgccgttcgcgcgactttgaagcgtgtggcc
aacaccggcagccggcttctgatcacgggcccggctggagcgggcaaggaagtggccgcg
cgcctgctccattcgtggagcccgcgtgcgcagagcgctttcgtcaccgtaagcgccgcc
cggatcactcccgaacgattcgagcaggaactgttcggcgaagaagccgatggcaagctg
gtgcgggcagggctgctggagatggcagacggcggaacgctgttcctcgacgaagttgcc
gatatgccggcctccagccaggcgcgcatcctgcgggtgctgaccgatcaggcatttgtc
cgcgttggtggcaatcgccagatcagggtcgacgtgcgcgtggtttcatcgacttcgcgc
ccgctcgagaaggaaattgccgagcggcgctttcgcgaagacctgtactatcgcctcaac
gtcgtccccgtcacgatcccgcctctcaacgaacggcgcgacgacattccctcgctgatc
gaccacttcttcacccgttatgcgagtgagcaggggattgcgccgccggtcgtctcggcc
gaggcgatggccgcgctgcaagcctatgactggccgggcaatgtgcggcagctgcgcaat
gtcgtcgaacgcacgatcatcctcgccccgcgcgaccggctcgaacggatcgaggccgac
atgctgccctccgaaatcgtcagcacgcgcttcggaggcgggaacacctcgtccgcgctg
atgggcgtgccgttgcgcgaagcgcgggagaatttcgagcgcgaatatttgaaagtccag
atccggcgattttccggcaacatttcaaagactgccagcttcattggcatggagcggtcg
gctttgcatcgaaaactcaagctgctcggcatggccgagcggcgcgaggacgaggacgac
gacgaatag

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