Novosphingobium olei: NSDW_20490
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Entry
NSDW_20490 CDS
T09939
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
nol
Novosphingobium olei
Pathway
nol00300
Lysine biosynthesis
nol00470
D-Amino acid metabolism
nol01100
Metabolic pathways
nol01110
Biosynthesis of secondary metabolites
nol01120
Microbial metabolism in diverse environments
nol01230
Biosynthesis of amino acids
Module
nol_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NSDW_20490
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NSDW_20490
Enzymes [BR:
nol01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NSDW_20490
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6603
Motif
Other DBs
NCBI-ProteinID:
BEV00955
LinkDB
All DBs
Position
complement(2196862..2198088)
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AA seq
408 aa
AA seq
DB search
MKPLGPIPEGFVAIDGELAIAGRKASDLVAEAGRTPLFVYARERLDARVAALRAAMPDRL
AIHYAVKANPFAPLLAHMAGLVDGFDVASGGELALVEAAGIDPAKVSFAGPGKRDAELEL
AIAKGVTLNLESVREAERALEIAGKIGVTPRLAIRVNPDFDLKGSGMKMGGGAKPFGIDA
DKVPALARRLVDAGADWRGFHIFAGSQALDAAAIIETQAQTLALAARLAEEAGVTVPKCN
LGGGFGIPYFPGDKPLDLAAVGNALAERFADMPAVLRDTAFCIELGRFLVGESGVYLTRV
IDRKQSHGEIFLVTDGGLHHQLAASGNFGTVVRRNYPSAIATRFDAPVEEEASVVGCLCT
PLDRLAEKGGFPRAEEGDLVAVFCAGAYGASASPVHFLGQGPAAEVLI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgctcggtcccatccccgaaggatttgtcgcgatcgacggcgaactcgccatt
gccggtcgcaaggcgagcgatctggtcgccgaggcgggccgcacccccctgttcgtctat
gcccgcgaacggctcgatgcgcgcgtcgccgccctgcgcgcggcgatgcccgaccggctg
gcgatccactatgcggtcaaggccaaccctttcgccccgctgctggcgcacatggccggg
ctggtcgacggcttcgacgtcgcctctggcggggagctcgctttggtcgaggcggccggg
atcgatcctgccaaggtcagcttcgccggccccggcaagcgcgatgccgagctggaactg
gccattgccaagggcgtgacgcttaatcttgaatcggtgcgcgaggccgagcgcgcgctg
gagattgccgggaagatcggcgtgacgccgcgccttgccattcgcgtcaatcccgatttc
gatctcaagggatcgggcatgaagatgggcggcggggccaagccgttcggcatcgatgcg
gacaaggtgcccgcgctggcgcgtcggctggtcgatgccggggccgactggcgcgggttc
cacatcttcgccggaagccaggcgctggacgccgccgcgatcatcgagacgcaggcgcag
acccttgccctcgctgcacggcttgccgaagaggcgggcgtgaccgtgccgaaatgcaat
ctcggcggcggcttcggcatcccctatttccccggcgacaagcccctggaccttgccgcc
gtcggcaatgccctggccgagcgcttcgccgatatgcccgcggttttgcgcgataccgct
ttctgcatcgagctgggccggtttctcgtcggcgaatcaggggtttacctgacccgggtg
atcgatcggaagcaaagccacggcgaaatatttctcgtcaccgatggcggcctgcatcac
cagctggcggccagcggcaacttcggcaccgtcgtcaggcgcaactatcccagcgccatc
gccacgcgcttcgatgcgccggtggaagaagaggcgagcgtggtcggatgcctgtgcaca
ccgcttgaccgacttgccgagaagggcggttttccgcgggccgaggagggtgatctggtc
gccgtgttctgtgccggagcttatggcgccagtgccagtccggtccatttcctggggcaa
gggccagcggcggaagttctcatctga
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