Novosphingobium olei: NSDW_21110
Help
Entry
NSDW_21110 CDS
T09939
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nol
Novosphingobium olei
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nol03032
]
NSDW_21110
03400 DNA repair and recombination proteins [BR:
nol03400
]
NSDW_21110
Enzymes [BR:
nol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NSDW_21110
DNA replication proteins [BR:
nol03032
]
Prokaryotic type
DNA Topoisomerases
NSDW_21110
DNA repair and recombination proteins [BR:
nol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NSDW_21110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BEV01017
LinkDB
All DBs
Position
complement(2258417..2259454)
Genome browser
AA seq
345 aa
AA seq
DB search
MESKPQALRFGKTRLIYVDDSLPGIRRRRCGRGWGYWDAHGQRITDREEIDRLNAIGLPP
AYGETWFCPAANGHILATGIDAKGRKQYRYHPEFRAAREGEKFDGCARFGHLLPLVRKRV
EDDLAAPKLTRERCIASVVRLLDTGGIRIGNEAYAKANESFGATTLRMDHVAVKGQVLRL
RFKAKSGKLREMRISDRGLVRFVKKMQDLPGQHLFQYLDEHGEACPVGSADVNAYLRETM
GDDFTAKHFRTWHASALGFELLADAREKVPLKALLMDVSERLGNTPAIARKSYIHPAVLA
LVDEQEAWREGLRLPRATRWLSRAERGLIALLEEGPRAVELLKAG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcaaaccccaggcgctgcgtttcggcaagacccgattgatctacgtcgacgat
tccctgcccggcatccgccgtcgccgctgtggccggggctgggggtactgggacgcgcac
ggccagcggatcaccgaccgcgaggagatcgaccggctgaatgccatcggtctgccgccc
gcctatggcgagacatggttctgccccgccgccaacggccacatcctggccaccgggatc
gatgccaaggggcgcaagcagtaccgttaccaccccgaattccgcgccgcgcgcgaaggg
gaaaagttcgacggctgcgcccgcttcggccacctgctgccgctggtgaggaagcgggtg
gaggacgaccttgccgcgcccaagctgacgcgcgaacgctgcatcgcctcggtcgtgcgc
ctgctcgataccggcggcatccgcattgggaacgaagcctatgccaaggccaacgaaagc
ttcggcgcgacgacgctgcgcatggaccacgtggccgtgaaggggcaggtgctgcgactg
cggttcaaggccaagtcgggcaagctgcgcgaaatgcgcatttccgaccgaggcctggtc
cgcttcgtcaagaagatgcaggacctgccgggccagcacctgttccagtacctcgacgaa
cacggcgaggcctgcccggtgggctcggccgacgtcaatgcgtacctgcgcgaaacaatg
ggcgatgacttcaccgccaagcatttccgcacctggcacgcgagcgcgctgggcttcgaa
ctgctcgccgatgcgcgcgagaaggtgccgttgaaagcgctgttgatggacgtgtccgaa
cggctgggcaacacgcccgccatcgcgcgcaagtcctacatccaccccgccgtgctggcg
ctggttgacgaacaggaagcctggcgcgaagggctgcgactgccgcgcgcgacccgctgg
ctgagccgcgccgaacgcggcctgatcgccctgctggaagaaggcccccgcgcggtcgaa
ctgctcaaggcggggtga
DBGET
integrated database retrieval system
