Novosphingobium olei: NSDW_21810
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Entry
NSDW_21810 CDS
T09939
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
nol
Novosphingobium olei
Pathway
nol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NSDW_21810 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nol03400
]
NSDW_21810 (uvrB)
DNA repair and recombination proteins [BR:
nol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NSDW_21810 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NSDW_21810 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
AAA_16
Microtub_bd
DUF87
AAA_33
AAA_22
SRP54
Motif
Other DBs
NCBI-ProteinID:
BEV01087
LinkDB
All DBs
Position
2336912..2339101
Genome browser
AA seq
729 aa
AA seq
DB search
MAELVIRRGLEEPDTSGTFVPHKPQRPEKSDGGRPFKVVSDYQPAGDQPTAIADLVESAL
GGEKTQVLLGVTGSGKTFTMAKVIEELQRPALILAPNKILAAQLYGEMKSFFPENAVEYF
VSYYDYYQPEAYVPRSDTYIEKESSTNEAIDRMRHSATRALLERDDVIIVASVSCIYGIG
SVETYSAMIFDLKVGTSVDQGEIIRKLVALQYKRNDAAFQRGTFRVRGDNLEIFPSHYDD
TAWRVSFFGDEIESIVEFDPLTGKAGTKLENVRVYANSHYVTPGPTMKQAAEAIRFELTE
RLKELTEEGRLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYL
PDNCLLFIDESHQTVPQVGAMARGDHRRKLTLAEYGFRLPSCIDNRPLRFNEWDAMRPQT
IAVSATPAQWEMEQAGGVFAEQVIRPTGLIDPPVLIRPVEDQVQDCINECRETAAKGYRT
LVTTLTKRMAEDLTEFMHEAGLKVRYMHSDVETLERIELIRDLRLGVYDVLVGINLLREG
LDIPECGLVCILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRMTGSMERAIAETD
RRRAKQQEYNELHGITPQTIKRNIHDIVADTASRDGVLVDIDAEGSNNLVGHNLRAYIEE
LERKMRAAAADLEFEEAGRLRDEIRKLEATELGLPEDERKAPIVGRSNEGKPGTRKTRFG
KSQKTKWGR
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggccgaactcgtcatccgccgcgggctcgaagagcccgacacttccggcaccttcgtc
ccccacaagccgcagcggcccgagaaatcggatggcgggcggccgttcaaggtcgtttcc
gactaccagccggcgggcgaccagccgaccgccattgccgatcttgtggagtccgcgctc
ggcggcgagaagacgcaagtgctgctcggcgtcaccggttcgggcaagacctttaccatg
gccaaggtgatcgaggaactgcagcgcccggcgctgatccttgcccccaacaagatcctt
gccgcacagctctacggcgaaatgaagagcttctttcccgagaacgcggtcgagtatttc
gtctcgtactacgactactaccagcccgaagcctacgtcccccgctcggacacctatatc
gagaaggaatcgtcgaccaacgaggcgatcgaccggatgcgccactcggcgacccgcgcg
ttgctcgaacgcgacgacgtgatcatcgtcgcctcggtctcgtgcatctacggcatcggc
tcggtcgaaacctattcggcaatgatcttcgacctgaaagtcggcaccagcgtcgaccag
ggcgagatcatccgcaagctcgtcgcgctgcagtacaagcgcaacgacgccgccttccag
cgcggcacgttccgcgtgcgcggcgacaatctggaaatcttcccctcgcactacgacgac
accgcctggcgcgtgagcttcttcggtgacgagatcgagagcatcgtcgaattcgatccg
ctgaccggcaaggcgggcacgaagctggaaaacgtgcgcgtctacgccaattcgcactac
gtcacccccggcccgacgatgaagcaggcggcagaggcgatccgcttcgaactgaccgaa
cggttgaaggagctgaccgaggaagggcgcctgctcgaagcccagcggctggaacagcgc
accaacttcgacctcgagatgatcgccgccaccggatcgtgcgcggggatcgaaaactac
agccgcttcctcaccggccgcctgcccggcgaaccgccgccgacgctgttcgaatacctg
cccgacaactgcctgctgtttatcgacgaaagccaccagaccgtgccgcaggtcggggcg
atggcgcgcggcgaccaccggcgcaagctgacgctggccgaatacggcttccgcctgccc
agctgcatcgacaaccgcccgctgcgcttcaacgaatgggacgcgatgcgcccgcagacc
atcgcagtttcagcaacccccgcgcagtgggagatggagcaggcgggcggcgtgttcgcc
gaacaggtgatccgccccaccggcctgatcgacccgcctgtgctgatccgcccggtcgag
gaccaggtgcaggactgcatcaacgagtgccgcgaaaccgcggccaagggctaccgcacg
ctcgtcaccacgctgaccaagcgcatggccgaggacctgaccgagttcatgcacgaagcg
gggctgaaggtccgctacatgcattcggacgtcgagacattggagcgcatcgagctgatc
cgcgacttgcgccttggcgtctatgacgtgctggtcggcatcaacctgctgcgcgaaggg
ctcgacattcccgaatgcggcctcgtctgcatcctcgacgccgacaaggaaggcttcctg
cgcagcgaaacctcgctgatccagaccatcggccgtgccgcgcgcaacgtcgacgggcgc
gtgatcctctatgccgaccgcatgaccggcagcatggagcgcgccatcgccgaaaccgac
cgccgccgcgccaagcagcaggaatacaacgaactccacggcatcacgccgcagaccatc
aagcgcaacatccacgacatcgtcgccgacaccgccagccgcgacggtgtgctggtcgac
atcgacgcggaaggcagcaacaacctcgtcggccacaaccttcgcgcctacatcgaggaa
ctggaacgcaagatgcgcgccgccgccgccgacctcgaattcgaggaagccggccgcctg
cgcgacgagatccgcaagctcgaagcaacggagctgggcctgccagaggacgagcgcaag
gcgccgatcgtcggccgcagcaacgaaggcaagccggggaccaggaagacgcggttcggg
aagagccagaagaccaagtgggggcggtga
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