Novosphingobium olei: NSDW_23930
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Entry
NSDW_23930 CDS
T09939
Name
(GenBank) bifunctional class I SAM-dependent methyltransferase/DEAD/DEAH box helicase
KO
K26273
protein strawberry notch
Organism
nol
Novosphingobium olei
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nol03036
]
NSDW_23930
Chromosome and associated proteins [BR:
nol03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
NSDW_23930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-ProteinID:
BEV01299
LinkDB
All DBs
Position
complement(2578872..2583113)
Genome browser
AA seq
1413 aa
AA seq
DB search
MSNSSLAFAFDEPSPPVVVMAAQTMASELAAGRVLSRSDVTRIMTEHFGGSDALGRWSVR
DAHAALELAQVQYLQSSDQIQLSAPVDEAEQYFSSLDARLPTQTNRSDEQIEWQQFATPP
RLAWLAARACALATGELVLEPSAGTGMLAVWAAKAGSRLALNEISPLRRDCLNAVFPAAR
VAGHDAELIDELLDPAIIPSVVLMNPPYSHGIERGHDSRTGLRHLRSAWNRLASGGRMVA
IMPEWFDCASFLTGLKGPISLRLDAAVERAFVKHGTGITTRLLVIDKVEGSTEAVTIRTN
EIGRLVDLVDALPARASLEAVPEQSSLPVRSPFRLVAAPRRPLPTPARITPAATAFGSLT
YHSLETPAPLAPQVGHYLPYRPSRIVIDGAAEHPTPLVESVAMGSIAAPMPEAVPQLPDG
LVAKGLLSAAQAETLIYAASAHARDLPGRFEPDDKGCSLKASAEGQTYRQGYFLGDGTGA
GKGRQVASVILDRWVRGERRHIWISKNEALLEDARRDWAALGGLPIDIQPLASWKLGTPI
AMREGILFVTYPTLRSGRNDATRLDQILAWAGDNFDGVIVFDEAHAMANAAGGEGSRGKV
NGSEQGIAGVRLQNLLPRARVLYASATGASDVNNLAYATRLGLWGPETAFANREAFVADI
RDGGIAAMELVARDLKSLGLYTARALSFAGVEYEILEHRLTEDQIAVYDAYAEAWAIIHA
NLREVLEATRIVDSETGGTLNSGAKSAALSIFEGTKQRFFAQLLLSMKLPSLLPAIDTVI
ADGHAVVVQLVSTAEAMLDRRLADLSNEEREALEIDLSPREYVIDYLAKSFPVRLMAVFT
DENGNPRSEPMTDEDGAPVLCRSALAARDRMIEQLCALPPIATALDAIIERFGVDQVAEV
TGRTRRLIIGRDGRQKLQSRSPRANVAETQAFMDGAKRILVFSDAGGTGRSYHADLAAKN
QARRVYFLLEPGWRADAAIQGLGRTNRTNQASAPLFRPVTTDVRGERRFISTIARRLDSL
GALTRGQRQTGGQNLFDPADNLESIYAKEALHRWFGLLFTGKLEAVSLGRFQELTGLRIE
APDGSMVDDLPPIQRWLNRILALPIALQNAIFDEFMGLVEARIDAARQAGTLDLGLETIA
VEDFNVLSDTLLRTDPPSGATTHLLELEIARALKPLTLKRLEELHGLTGQRQRPVRNARS
GRVALLVPARSILADDGTRVARFELLRPLKRSHITEDQLTESSWEYISVDALRNAWSTEV
EEARTRHKRERLYLATGLLLPVWDKLPSDFVRVGRISAADGRSLLGREVPVHCVPELCRA
LGLAREQTLSAEDIVQTVLVTGRPMEFAGREQLMVKRSLVNGSQRIELTGWSVARLDWYK
AQGCFTEIIRYQTRLFVPIEGAPSVIARLASSA
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgtccaattcttccctcgcctttgcattcgatgaaccatctccgcccgtcgttgtgatg
gcggcccagaccatggcttctgagctggcggcaggccgcgtgctctcacgcagcgacgtc
acgcgcatcatgacggagcacttcgggggcagcgatgctctcgggcgttggtcagttcgt
gacgctcacgcagctcttgagctggcacaggttcaatacctgcaatcatcggatcagatc
cagctctcggctccggtcgacgaggcggaacagtacttcagctccctcgatgcccgattg
ccgacccagaccaatcgcagcgacgagcagatcgaatggcagcagtttgcgacgccgccg
cgccttgcctggcttgctgctcgggcctgcgcgctggccactggcgagcttgtgctcgaa
ccctcggccggaacgggcatgctcgcggtctgggccgccaaggccggctcgcgccttgcc
ctcaacgaaatctcgccgctccgccgcgactgcctgaatgctgtgttcccggctgcccga
gtggccggccatgacgctgagctgatcgacgaactgcttgatccagccatcatcccgagc
gtcgtgttgatgaaccctccctattcgcacggcattgagcgagggcacgatagtcgcacc
ggcttgcgccacctgaggtcggcctggaaccgtctggcgtccggcggccggatggtcgcg
attatgccggaatggttcgattgcgcgagctttcttacggggctgaaggggccgatctcg
ctgcggctcgatgccgccgtcgaacgtgcgttcgtcaagcatggcaccgggatcaccacg
cggctgctggtcatcgacaaggtggaaggctccacggaggcggtcactatccgtaccaac
gagatcggccggctagtcgatcttgtcgatgctttgccggctcgcgccagcttggaggct
gttcccgagcaatcgagccttccagttcgttcgccgtttcgcctggtggccgcgccgcgc
aggccattgccgacaccagcaaggatcactcctgcagccaccgctttcgggtcgctcacc
taccactcgctcgaaacccctgcgccgcttgcccctcaggtcggccactatctgccctat
cgcccgagcaggatcgtgatcgatggcgcggccgagcatccaacgccgctcgttgagtcc
gtcgctatggggtcgatcgccgcaccgatgcccgaagctgtgccgcagctgcccgacggg
ctggttgccaagggactgctgtctgctgcccaggcagagactctgatctacgctgcaagc
gcccatgcgcgcgatctgcccggccggttcgagccagatgacaagggctgttcgctcaag
gcatcagcggaagggcagacctaccggcagggctatttcctcggggatggaacgggtgcc
ggcaagggccgacaggttgccagcgtcattctcgaccgctgggtgcgcggggaacggcgc
catatctggatttcaaagaatgaagcgctgctggaagatgcccggcgcgactgggctgcg
cttggcggcctgccgatcgacatccagccgcttgcatcctggaagctcggcacccccatc
gccatgcgcgagggcattctcttcgtgacctacccgaccctgcgttcgggccgaaacgat
gcgactcgcctcgaccagatcctcgcctgggcgggcgacaacttcgacggcgtgatcgtg
ttcgacgaggcgcatgccatggccaatgcagctggcggagaaggatcgcggggcaaggtc
aatggctcggagcagggtatcgctggcgtccgcctacagaacctcctgccgcgggcacgc
gtgctctacgcctcggcaaccggtgcgtcagacgtcaacaacctggcctatgcgacgcgc
cttggcctgtggggtccggagaccgccttcgccaatcgcgaggcgttcgtcgccgacatt
cgtgacggcgggatcgcagcgatggagttggtcgcccgggacctcaagtcgctcggccta
tacaccgcgcgcgcattgtccttcgccggcgtcgaatacgagatcctcgagcatcgcctg
accgaggatcagatcgcggtctatgatgcctacgctgaagcctgggcgatcatccacgcc
aacctgcgcgaagtgctggaggccacgaggatcgtcgatagcgaaaccggcgggacgctc
aactccggggccaagtccgcagcgctgtcgatctttgaggggaccaagcagcgcttcttc
gcgcagctgcttctgtcgatgaagctcccaagcctgctgcccgcgatcgacacggtgatt
gccgatggtcacgctgttgtcgtccagctggtgtcgaccgcagaagccatgctcgaccga
cgacttgccgacctgtctaacgaggaacgcgaagctctcgagatcgacctctccccacgg
gaatatgtgatcgactatctcgccaagagctttcctgtccgcctgatggcagtgttcacc
gacgaaaacggcaatcctcgctccgagcctatgactgacgaggatggcgcacctgtgctc
tgtcgctctgcgcttgccgcacgcgaccggatgatcgagcagctctgcgctctgccgccg
attgccaccgccctcgatgccatcattgagcgcttcggcgttgaccaggtggcggaagtc
accggtcgcacacgtcggctcattatcggccgcgatgggcgccagaaacttcaatcccgc
tcgccgcgcgccaatgtcgctgaaacccaggcattcatggacggtgccaagcgcatcctg
gtgttctccgatgccggaggcaccgggcgcagctaccacgccgatctggccgccaagaac
caggctcgccgcgtctacttcctgctcgagccgggctggcgggctgacgccgcaatccag
ggacttggccgcaccaatcgcaccaaccaggcatcggctccgttgttccggcccgtgacc
accgatgtgcgcggcgagcgccgcttcatctcgacgatcgcgcggcgtctggacagcctt
ggtgctctgacgcgcgggcagcgccagactggtggccagaacctgttcgatcccgctgac
aatctcgagagcatctacgccaaggaggcgctccaccgctggttcggcttgctatttacc
ggcaagcttgaagcggtaagtctggggcgctttcaggagctgacaggtctcaggatcgaa
gcccctgacgggtcgatggtcgatgacctgccgccgatccagcgctggctcaaccgcatc
ctcgcacttcccatcgccttacagaacgcgatctttgacgagttcatggggctggtcgag
gcgcgtatcgatgccgcccgacaggccggcacactcgacctcggcctagagaccatcgcg
gtcgaagacttcaatgtcctgtccgacacgttgctgcgcaccgatccgccctcgggcgca
acaacccatctgctggaactggaaatcgccagagccttgaagccgctcaccctgaagcga
cttgaggagcttcacgggcttaccgggcagcggcagcgcccggttcgtaacgcccgctct
ggtcgggtcgccctgctggtccccgcccgtagtattcttgccgatgacggtacgcgcgtg
gcccgcttcgaattgctgcgtccgctcaaacgcagtcacatcaccgaggatcagctgact
gagagcagctgggagtatatctccgtcgacgctctccgcaatgcgtggtcaaccgaggtc
gaggaagctcggaccagacacaagcgcgagcgcctctatcttgcgacgggtctcctactg
ccggtctgggacaagcttccttcggatttcgtgagggtcggtcgaatctcggcggcggat
ggccggtcgctccttggccgggaggttcctgtccattgtgttccggaactgtgccgggcg
ctgggtctggcacgcgagcaaacgctctctgccgaagatatcgttcagaccgtcctggtg
accggccgacccatggaattcgccggccgtgagcagctcatggtcaagcgcagcctggtc
aatggctcacagcgaattgaattgaccggatggagcgtagcccgccttgactggtacaag
gcccaaggctgctttacggaaatcatccgctaccagacccggctgttcgtgccgatcgag
ggcgcgccgagcgtgattgccagattggcatcatccgcataa
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