Novosphingobium olei: NSDW_24050
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Entry
NSDW_24050 CDS
T09939
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
nol
Novosphingobium olei
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nol03016
]
NSDW_24050 (rnd)
Enzymes [BR:
nol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NSDW_24050 (rnd)
Transfer RNA biogenesis [BR:
nol03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NSDW_24050 (rnd)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
BEV01311
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All DBs
Position
2595113..2596387
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AA seq
424 aa
AA seq
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MKIHPLITTSDALAELCERLAKANFVTVDTEFMRENTYFPELCLVQIADENEAAAIDPMA
PGIDLTPLLDLLVDNEDVLKVFHAGGQDVEIIYNLTGKTPHPIFDTQIAMMAISQSEQIG
YSNLVESWLGFSIDKGARFTDWARRPLTERQIEYAIGDVTHLSRIFPKMLRRLIKTGRGE
WLDIEMEKLADPENYRSDPDTVWQKIRAPSRNPAVLGRLKALAAWREAEAMDKNIPRGRI
MRDETLADIASHPPREQAELAKVRGLSSGWKDNDIGRRLMQCLADAKPLTEAEMPPRTPR
GAPLGKEGALVADLLKLLLKIRSREIDIAARLLARSDDLELLAAGQRKNLPILEGWRFEQ
FGRDALELVEGKLAFAVVKGKLKMAHIDKIASDREDPAIVVDDADADAPVAVAEDTPEET
PAQD
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaagatacacccgctgatcaccacgagcgatgcgcttgccgaactgtgcgagcgactg
gccaaggccaacttcgtcaccgtcgataccgagttcatgcgcgagaacacctacttcccc
gagctctgcctggtgcagatcgcggacgagaacgaggcggccgcgatcgacccgatggcg
ccggggatcgacctgaccccgctgctggacctgctggtcgacaatgaagacgtgctgaag
gtcttccacgccggcgggcaggacgtggagatcatctacaacctgaccggcaagaccccg
catccgatcttcgacacccagatcgcgatgatggcgatcagccagagcgagcagatcggc
tattccaacctggtcgaaagctggctcggcttttccatcgacaagggcgcgcgcttcacc
gactgggcgcgccgcccgctgaccgaacgccagatcgaatacgcgatcggcgacgtcacc
cacctgtccaggatcttccccaagatgctgcgccgcctgatcaagaccggccgcggcgaa
tggctcgatatcgagatggagaagctggcggacccggaaaactaccgcagcgatcccgac
acggtgtggcagaagatccgcgcgccgagccgcaatccggcggtgctgggccggttgaag
gcactggccgcctggcgcgaggccgaggcgatggacaagaacatcccgcgcggccgcatc
atgcgcgatgaaacactggccgacatcgccagccatccgccgcgcgaacaggccgaatta
gccaaggtgcgcggcctctcgagcgggtggaaggacaacgacatcggccgccgcctgatg
cagtgcctggccgatgccaagccgctgaccgaagccgaaatgccgccccgcaccccgcgc
ggcgcgccgctgggcaaggaaggcgcgctggtggcggacctgctcaagctgctgctcaag
atccgcagccgcgagatcgacatcgccgcccgcctgctggcgcgcagcgacgatctggag
ctgctcgccgccgggcagcgcaagaacctgcccatcctggaaggctggcggttcgaacag
ttcggtcgcgatgcgctcgaactggtcgaaggcaagctcgccttcgcggtggtgaagggc
aagctcaagatggcgcacatcgacaagatcgcgagcgatcgcgaggatccggccatcgtg
gtcgacgatgcagatgcggacgcccccgttgcggttgccgaggacaccccggaagagacg
cccgcgcaagactga
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