Novosphingobium olei: NSDW_24410
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Entry
NSDW_24410 CDS
T09939
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
nol
Novosphingobium olei
Pathway
nol00300
Lysine biosynthesis
nol00470
D-Amino acid metabolism
nol01100
Metabolic pathways
nol01110
Biosynthesis of secondary metabolites
nol01120
Microbial metabolism in diverse environments
nol01230
Biosynthesis of amino acids
Module
nol_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NSDW_24410 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NSDW_24410 (dapF)
Enzymes [BR:
nol01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NSDW_24410 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BEV01347
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Position
2628406..2629215
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AA seq
269 aa
AA seq
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MRTPFRKMHGLGNDFIVIDARARAVVMSNARAAALADRRTGIGCDQLIVLEPSEIADVRM
RIFNADGGEVEACGNASRAVGLLLGGEQRIETLGGTIASSAGADGVSVDMGMPRFDWDAI
PLAYAMDTLTMPVGWEDLSDPTAVNVGNPHVIFFVPDCDAVDLARLGPVIETDPLFPARV
NVNVASVVGSDHLRLRVWERGVGLTRACGTGACATAIGAMRRKLVGRTTRVDLPGGTLTI
AWREDGSILMTGPAATSFEGTFEDSDFPA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgccctttcgcaagatgcacggccttggcaacgatttcatcgtgatcgacgcg
cgtgcgcgcgccgtcgtcatgtccaacgcccgtgccgccgcgctggccgaccgtcgcacc
gggatcggctgcgaccagctgatcgtgctcgaaccgagcgagatcgccgatgtgcgcatg
cgcatcttcaacgccgacggcggcgaagtggaagcctgcggcaatgccagccgcgcggtc
ggcctgctgctgggcggcgagcagcggatcgagacgcttggcgggacgatcgcatcaagc
gcgggggcagacggcgtcagcgtcgacatgggcatgccccggttcgattgggacgccatc
ccgcttgcctacgcgatggacacgctgaccatgccggtcggctgggaagacctgagcgac
ccgaccgccgtcaacgtcggcaatccacacgtgatcttcttcgtgcccgactgcgatgcg
gtcgaccttgcccggctggggccggtgatcgagaccgacccgctgtttccggcgcgcgtc
aacgtcaacgtagcgagtgtggtcggctccgaccacctgcgcctgcgcgtatgggagcgc
ggggtcggcctgacgcgagcgtgcggcaccggcgcctgcgccaccgcgatcggcgcgatg
cggcgcaagctggtcggccgcaccacccgggtagacctgcctggcggcacgctgaccatc
gcctggcgcgaggatggctcgatcctgatgaccgggcctgcggcgacgagcttcgaaggc
accttcgaggattcggacttcccggcatga
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