Novosphingobium olei: NSDW_24420
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Entry
NSDW_24420 CDS
T09939
Name
(GenBank) MiaB/RimO family radical SAM methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
nol
Novosphingobium olei
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nol03016
]
NSDW_24420
Enzymes [BR:
nol01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
NSDW_24420
Transfer RNA biogenesis [BR:
nol03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
NSDW_24420
Prokaryotic type
Methylthiotransferases
NSDW_24420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
Motif
Other DBs
NCBI-ProteinID:
BEV01348
LinkDB
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Position
2629226..2630440
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AA seq
404 aa
AA seq
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MTVEVVTLGCRLNLAESEAIRAVLADGPPTVVVNSCAVTAEAVRQSRRTVRRLRREHPDA
RLLVTGCAATIEPDAFAAMSEVDGVVPNDAKSDPAAWRGEPAALPAALDPATPDSAPLRA
SAHHTRAFVPVQNGCDHACTFCIIPQGRGASRSLPVADVVRQVERHLALGVNEVVLTGVD
VTSWGADLPGEPRLGDLVAELLAACPTLPRLRLSSLDGIEIDDLLFELITGEARVMPHVH
LSLQSGSDMILKRMKRRHSRAQAIALVERLQSARPGIAIGADLIAGFPTEDAGMHADNVS
IVAACNIVHGHVFPYSPRPGTPAARMPQVAPPLVRERAAEVRAAVAANRERWLASRVGVA
AQVLAERDGTGHAPDFAPYRLPEGTLPGSLVTLKPTRIVEGMLA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtagaggtcgtgactctcggctgccgcctgaaccttgccgagagcgaggcgatc
cgtgccgtgctggccgatggcccgccgacggtggtggtcaattcatgcgcggtgaccgcc
gaagccgtgcgccagtcgcgccgcacggtgcgccgcctgcgccgcgaacatcccgacgcc
cgcctgctggtgaccggctgcgccgcgacgatcgagccggacgccttcgccgcgatgagc
gaagtcgatggcgtggtgccgaacgatgccaagagcgatcccgccgcgtggcggggcgag
ccggcggcccttcccgccgcgcttgatccggccacgcccgattccgccccactgcgtgca
agcgcgcatcacacccgcgccttcgtgccggtgcagaacggttgcgaccatgcctgcacc
ttctgcatcattccgcagggccgcggggcgagccgctccctgccggttgccgacgtcgtg
cggcaggtggagcgccaccttgcgctgggcgtcaacgaagtggtgctgaccggcgtggac
gtgaccagctggggtgccgatctgcccggcgagcccaggctcggcgatctggtggccgag
cttctggccgcctgccccacccttccccggctgcggctgtcctcgctcgacggcatcgag
atcgacgacctgctgttcgagctgatcaccggcgaggcgcgcgtgatgccgcacgtccac
ctttcgctgcaatcgggcagcgacatgatcctcaagcggatgaagcggcgccatagccgc
gcgcaggcgatcgcgctggtcgaacggctgcagtccgcccggcccggaatcgcgataggg
gcagacctgatcgcgggcttccccaccgaggacgccggcatgcatgccgacaacgtctcg
atcgtggccgcctgcaatatcgtgcacggccacgtcttcccctattcgccccgtccaggc
acgcccgccgcgcggatgccgcaggtcgccccgcctctggtgcgcgaacgcgcggcggaa
gtacgtgccgccgtggccgcgaaccgggaacgctggctggcttcgcgcgtcggcgttgcg
gcgcaagtgcttgccgaacgcgacggcaccggccatgccccggacttcgccccctatcgt
ctgcccgaaggcaccctgccgggcagtctcgtcacgttgaagcctacaaggatcgtcgaa
ggaatgctggcatga
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